Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
GDNFP39905 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GDNFP39905 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.51■□□□□ 0.39
GDNFP39905 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GDNFP39905 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.51■□□□□ 0.39
GDNFP39905 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 AL354811.1-201ENST00000610286 706 ntBASIC17.51■□□□□ 0.39
GDNFP39905 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
GDNFP39905 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.51■□□□□ 0.39
GDNFP39905 AC011484.1-201ENST00000377652 1995 ntBASIC17.51■□□□□ 0.39
GDNFP39905 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GDNFP39905 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDNFP39905 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 AC005332.7-201ENST00000614046 2005 ntBASIC17.5■□□□□ 0.39
GDNFP39905 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GDNFP39905 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
GDNFP39905 AC009237.3-201ENST00000393279 1427 ntBASIC17.5■□□□□ 0.39
GDNFP39905 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.5■□□□□ 0.39
GDNFP39905 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GDNFP39905 TPRG1LP1-201ENST00000598702 760 ntBASIC17.5■□□□□ 0.39
GDNFP39905 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.5■□□□□ 0.39
GDNFP39905 AL358852.1-201ENST00000623174 1268 ntBASIC17.5■□□□□ 0.39
GDNFP39905 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.5■□□□□ 0.39
GDNFP39905 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.5■□□□□ 0.39
GDNFP39905 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDNFP39905 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.49■□□□□ 0.39
GDNFP39905 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GDNFP39905 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
GDNFP39905 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GDNFP39905 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.49■□□□□ 0.39
GDNFP39905 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GDNFP39905 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
GDNFP39905 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GDNFP39905 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDNFP39905 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.48■□□□□ 0.39
GDNFP39905 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.48■□□□□ 0.39
GDNFP39905 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
GDNFP39905 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GDNFP39905 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GDNFP39905 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.48■□□□□ 0.39
GDNFP39905 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GDNFP39905 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GDNFP39905 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDNFP39905 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms