Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 PP12613-201ENST00000424958 2230 ntBASIC12.78□□□□□ -0.36
SVIPQ8NHG7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 CROCCP1-201ENST00000426910 5675 ntBASIC12.78□□□□□ -0.36
SVIPQ8NHG7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SVIPQ8NHG7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 AC126763.1-201ENST00000552015 2118 ntBASIC12.77□□□□□ -0.36
SVIPQ8NHG7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SVIPQ8NHG7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.77□□□□□ -0.37
SVIPQ8NHG7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SVIPQ8NHG7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms