RNA–Protein interactions for RNA: ENST00000370471.7

FMR1-204, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 4,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-204ENST00000370471 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
FMR1-204ENST00000370471 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
FMR1-204ENST00000370471 SHROOM4Q9ULL8 1493 aa36.07■■■■□ 3.36
FMR1-204ENST00000370471 SUPT5HO00267 1087 aaKnown RBP35.82■■■■□ 3.32
FMR1-204ENST00000370471 EHMT2Q96KQ7 1210 aa33.78■■■■□ 3
FMR1-204ENST00000370471 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
FMR1-204ENST00000370471 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
FMR1-204ENST00000370471 FAM9AQ8IZU1 332 aaPredicted RBP33.44■■■□□ 2.94
FMR1-204ENST00000370471 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
FMR1-204ENST00000370471 LOC105371045A0A1W2PR82 267 aa33.09■■■□□ 2.89
FMR1-204ENST00000370471 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
FMR1-204ENST00000370471 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
FMR1-204ENST00000370471 ABCC9O60706 1549 aa32.73■■■□□ 2.83
FMR1-204ENST00000370471 TTBK1Q5TCY1 1321 aaPredicted RBP32.57■■■□□ 2.8
FMR1-204ENST00000370471 HRCP23327 699 aa32.5■■■□□ 2.79
FMR1-204ENST00000370471 PPARGC1BQ86YN6 1023 aaKnown RBP32.44■■■□□ 2.78
FMR1-204ENST00000370471 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
FMR1-204ENST00000370471 TRIM26Q12899 539 aaPredicted RBP32.26■■■□□ 2.76
FMR1-204ENST00000370471 SCRIBQ14160 1630 aa32.25■■■□□ 2.75
FMR1-204ENST00000370471 RANGAP1P46060 587 aaPredicted RBP32.08■■■□□ 2.73
FMR1-204ENST00000370471 UBTFP17480 764 aaKnown RBP32.02■■■□□ 2.72
FMR1-204ENST00000370471 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.71
FMR1-204ENST00000370471 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
FMR1-204ENST00000370471 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
FMR1-204ENST00000370471 ZEB1P37275 1124 aaPredicted RBP31.81■■■□□ 2.68
FMR1-204ENST00000370471 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
FMR1-204ENST00000370471 APLP2Q06481 763 aa31.79■■■□□ 2.68
FMR1-204ENST00000370471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.45■■■□□ 2.63
FMR1-204ENST00000370471 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
FMR1-204ENST00000370471 NACADO15069 1562 aa31.24■■■□□ 2.59
FMR1-204ENST00000370471 HNRNPUL2Q1KMD3 747 aaKnown RBP31.18■■■□□ 2.58
FMR1-204ENST00000370471 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
FMR1-204ENST00000370471 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
FMR1-204ENST00000370471 ATP1B4Q9UN42 357 aaPredicted RBP31.08■■■□□ 2.57
FMR1-204ENST00000370471 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
FMR1-204ENST00000370471 ITGAEP38570 1179 aa30.85■■■□□ 2.53
FMR1-204ENST00000370471 YTHDC1Q96MU7 727 aaKnown RBP30.84■■■□□ 2.53
FMR1-204ENST00000370471 CENPBP07199 599 aaPredicted RBP30.77■■■□□ 2.52
FMR1-204ENST00000370471 WIZO95785 1651 aa30.73■■■□□ 2.51
FMR1-204ENST00000370471 BAZ1AQ9NRL2 1556 aaPredicted RBP30.73■■■□□ 2.51
FMR1-204ENST00000370471 DIEXFQ68CQ4 756 aaKnown RBP30.66■■■□□ 2.5
FMR1-204ENST00000370471 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
FMR1-204ENST00000370471 CCDC88BA6NC98 1476 aa30.51■■■□□ 2.47
FMR1-204ENST00000370471 SOGA1O94964 1423 aa30.5■■■□□ 2.47
FMR1-204ENST00000370471 CEP162Q5TB80 1403 aa30.47■■■□□ 2.47
FMR1-204ENST00000370471 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
FMR1-204ENST00000370471 P3H3Q8IVL6 736 aa30.26■■■□□ 2.44
FMR1-204ENST00000370471 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.43
FMR1-204ENST00000370471 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
FMR1-204ENST00000370471 CLIP1P30622 1438 aa30.21■■■□□ 2.43
FMR1-204ENST00000370471 ZNF316A6NFI3 1004 aaPredicted RBP30.2■■■□□ 2.43
FMR1-204ENST00000370471 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
FMR1-204ENST00000370471 EEA1Q15075 1411 aa30.19■■■□□ 2.42
FMR1-204ENST00000370471 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
FMR1-204ENST00000370471 FAM50AQ14320 339 aaKnown RBP30.18■■■□□ 2.42
FMR1-204ENST00000370471 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
FMR1-204ENST00000370471 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
FMR1-204ENST00000370471 GTF3C3Q9Y5Q9 886 aa30.03■■■□□ 2.4
FMR1-204ENST00000370471 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
FMR1-204ENST00000370471 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
FMR1-204ENST00000370471 ACIN1Q9UKV3 1341 aaKnown RBP29.95■■■□□ 2.39
FMR1-204ENST00000370471 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
FMR1-204ENST00000370471 PELP1Q8IZL8 1130 aaKnown RBP29.9■■■□□ 2.38
FMR1-204ENST00000370471 SCAF1Q9H7N4 1312 aaKnown RBP29.86■■■□□ 2.37
FMR1-204ENST00000370471 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
FMR1-204ENST00000370471 ARID3CA6NKF2 412 aa29.75■■■□□ 2.35
FMR1-204ENST00000370471 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
FMR1-204ENST00000370471 MIER1Q8N108 512 aa29.68■■■□□ 2.34
FMR1-204ENST00000370471 RAPGEF2Q9Y4G8 1499 aa29.62■■■□□ 2.33
FMR1-204ENST00000370471 KANK4Q5T7N3 995 aaPredicted RBP29.61■■■□□ 2.33
FMR1-204ENST00000370471 VPS8Q8N3P4 1428 aa29.6■■■□□ 2.33
FMR1-204ENST00000370471 TRIM52Q96A61 297 aa29.54■■■□□ 2.32
FMR1-204ENST00000370471 CNGB1Q14028 1251 aaPredicted RBP29.5■■■□□ 2.31
FMR1-204ENST00000370471 CUX2O14529 1486 aa29.45■■■□□ 2.3
FMR1-204ENST00000370471 NEFLP07196 543 aa29.43■■■□□ 2.3
FMR1-204ENST00000370471 FBLN2P98095 1184 aa29.43■■■□□ 2.3
FMR1-204ENST00000370471 POLR3GLQ9BT43 218 aa29.42■■■□□ 2.3
FMR1-204ENST00000370471 HIRIP3Q9BW71 556 aaPredicted RBP29.36■■■□□ 2.29
FMR1-204ENST00000370471 CARMIL1Q5VZK9 1371 aa29.35■■■□□ 2.29
FMR1-204ENST00000370471 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
FMR1-204ENST00000370471 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
FMR1-204ENST00000370471 DDX10Q13206 875 aaKnown RBP29.32■■■□□ 2.28
FMR1-204ENST00000370471 CHIC2Q9UKJ5 165 aa29.3■■■□□ 2.28
FMR1-204ENST00000370471 BCANQ96GW7 911 aa29.26■■■□□ 2.27
FMR1-204ENST00000370471 CCNB3Q8WWL7 1395 aa29.25■■■□□ 2.27
FMR1-204ENST00000370471 MTUS2Q5JR59 1369 aa29.23■■■□□ 2.27
FMR1-204ENST00000370471 SIN3AQ96ST3 1273 aa29.21■■■□□ 2.27
FMR1-204ENST00000370471 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
FMR1-204ENST00000370471 ANP32CO43423 234 aa29.17■■■□□ 2.26
FMR1-204ENST00000370471 CADPSQ9ULU8 1353 aa29.17■■■□□ 2.26
FMR1-204ENST00000370471 TONSLQ96HA7 1378 aa29.11■■■□□ 2.25
FMR1-204ENST00000370471 ZNF326Q5BKZ1 582 aaKnown RBP29.11■■■□□ 2.25
FMR1-204ENST00000370471 ZNF777Q9ULD5 760 aaPredicted RBP29.1■■■□□ 2.25
FMR1-204ENST00000370471 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
FMR1-204ENST00000370471 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
FMR1-204ENST00000370471 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
FMR1-204ENST00000370471 KIF21BO75037 1637 aa29.04■■■□□ 2.24
FMR1-204ENST00000370471 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
FMR1-204ENST00000370471 CLSPNQ9HAW4 1339 aa29.02■■■□□ 2.24
FMR1-204ENST00000370471 IGF1RP08069 1367 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms