RNA–Protein interactions for RNA: ENST00000290585.8

CELF3-202, Transcript of CUGBP Elav-like family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CELF3, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF3-202ENST00000290585 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
CELF3-202ENST00000290585 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
CELF3-202ENST00000290585 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
CELF3-202ENST00000290585 ABCC9O60706 1549 aa21.76■■□□□ 1.07
CELF3-202ENST00000290585 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
CELF3-202ENST00000290585 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
CELF3-202ENST00000290585 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
CELF3-202ENST00000290585 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
CELF3-202ENST00000290585 NACADO15069 1562 aa21.28■■□□□ 1
CELF3-202ENST00000290585 SHROOM4Q9ULL8 1493 aa21.27■■□□□ 1
CELF3-202ENST00000290585 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
CELF3-202ENST00000290585 HRCP23327 699 aa21.11■□□□□ 0.97
CELF3-202ENST00000290585 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
CELF3-202ENST00000290585 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
CELF3-202ENST00000290585 MYT1Q01538 1121 aa20.9■□□□□ 0.94
CELF3-202ENST00000290585 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
CELF3-202ENST00000290585 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
CELF3-202ENST00000290585 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
CELF3-202ENST00000290585 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.89
CELF3-202ENST00000290585 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
CELF3-202ENST00000290585 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
CELF3-202ENST00000290585 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
CELF3-202ENST00000290585 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
CELF3-202ENST00000290585 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
CELF3-202ENST00000290585 TTBK1Q5TCY1 1321 aaPredicted RBP20.41■□□□□ 0.86
CELF3-202ENST00000290585 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
CELF3-202ENST00000290585 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
CELF3-202ENST00000290585 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
CELF3-202ENST00000290585 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
CELF3-202ENST00000290585 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
CELF3-202ENST00000290585 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
CELF3-202ENST00000290585 WIZO95785 1651 aa20.03■□□□□ 0.8
CELF3-202ENST00000290585 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.79
CELF3-202ENST00000290585 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
CELF3-202ENST00000290585 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
CELF3-202ENST00000290585 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
CELF3-202ENST00000290585 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
CELF3-202ENST00000290585 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
CELF3-202ENST00000290585 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
CELF3-202ENST00000290585 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
CELF3-202ENST00000290585 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
CELF3-202ENST00000290585 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
CELF3-202ENST00000290585 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
CELF3-202ENST00000290585 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
CELF3-202ENST00000290585 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
CELF3-202ENST00000290585 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
CELF3-202ENST00000290585 APLP2Q06481 763 aa19.61■□□□□ 0.73
CELF3-202ENST00000290585 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
CELF3-202ENST00000290585 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
CELF3-202ENST00000290585 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
CELF3-202ENST00000290585 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
CELF3-202ENST00000290585 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
CELF3-202ENST00000290585 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
CELF3-202ENST00000290585 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
CELF3-202ENST00000290585 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
CELF3-202ENST00000290585 CFTRP13569 1480 aa19.2■□□□□ 0.66
CELF3-202ENST00000290585 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
CELF3-202ENST00000290585 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
CELF3-202ENST00000290585 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
CELF3-202ENST00000290585 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
CELF3-202ENST00000290585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.66
CELF3-202ENST00000290585 NESP48681 1621 aa19.08■□□□□ 0.64
CELF3-202ENST00000290585 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
CELF3-202ENST00000290585 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
CELF3-202ENST00000290585 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
CELF3-202ENST00000290585 LAMC3Q9Y6N6 1575 aa19■□□□□ 0.63
CELF3-202ENST00000290585 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
CELF3-202ENST00000290585 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
CELF3-202ENST00000290585 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
CELF3-202ENST00000290585 CUX1P39880 1505 aa18.89■□□□□ 0.62
CELF3-202ENST00000290585 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
CELF3-202ENST00000290585 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
CELF3-202ENST00000290585 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
CELF3-202ENST00000290585 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
CELF3-202ENST00000290585 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
CELF3-202ENST00000290585 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
CELF3-202ENST00000290585 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
CELF3-202ENST00000290585 SOGA1O94964 1423 aa18.79■□□□□ 0.6
CELF3-202ENST00000290585 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
CELF3-202ENST00000290585 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
CELF3-202ENST00000290585 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
CELF3-202ENST00000290585 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
CELF3-202ENST00000290585 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
CELF3-202ENST00000290585 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
CELF3-202ENST00000290585 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
CELF3-202ENST00000290585 MIER1Q8N108 512 aa18.65■□□□□ 0.58
CELF3-202ENST00000290585 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
CELF3-202ENST00000290585 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.58
CELF3-202ENST00000290585 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
CELF3-202ENST00000290585 EEA1Q15075 1411 aa18.64■□□□□ 0.57
CELF3-202ENST00000290585 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
CELF3-202ENST00000290585 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
CELF3-202ENST00000290585 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
CELF3-202ENST00000290585 WDR62O43379 1518 aa18.56■□□□□ 0.56
CELF3-202ENST00000290585 CUX2O14529 1486 aa18.55■□□□□ 0.56
CELF3-202ENST00000290585 KIF27Q86VH2 1401 aa18.55■□□□□ 0.56
CELF3-202ENST00000290585 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
CELF3-202ENST00000290585 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
CELF3-202ENST00000290585 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
CELF3-202ENST00000290585 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms