Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NAA10-206ENST00000432089 599 ntTSL 339.94■■■■□ 3.984e-7■□□□□ 10.8
PABPN1Q86U42 NAA10-210ENST00000467451 743 ntTSL 238.2■■■■□ 3.714e-7■□□□□ 10.8
PABPN1Q86U42 PLD1-208ENST00000463281 694 ntTSL 416.98■□□□□ 0.311e-9■□□□□ 10.8
PABPN1Q86U42 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC10.23□□□□□ -0.771e-9■□□□□ 10.8
PABPN1Q86U42 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.171e-9■□□□□ 10.8
PABPN1Q86U42 DDX39B-218ENST00000478365 439 ntTSL 215.53■□□□□ 0.084e-19■□□□□ 10.8
PABPN1Q86U42 IRF3-220ENST00000598108 1118 ntTSL 345.47■■■■■ 4.873e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-216ENST00000531897 785 ntTSL 543.39■■■■■ 4.543e-7■□□□□ 10.7
PABPN1Q86U42 MTA1-209ENST00000469140 1666 ntTSL 542.78■■■■■ 4.442e-7■□□□□ 10.7
PABPN1Q86U42 PFKL-212ENST00000628044 129 ntTSL 3 BASIC42.26■■■■■ 4.363e-7■□□□□ 10.7
PABPN1Q86U42 PFKL-210ENST00000496824 1063 ntTSL 541.49■■■■■ 4.233e-7■□□□□ 10.7
PABPN1Q86U42 IRF3-231ENST00000602190 413 ntTSL 339.49■■■■□ 3.913e-7■□□□□ 10.7
PABPN1Q86U42 IRF3-209ENST00000595034 739 ntTSL 337.83■■■■□ 3.653e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-217ENST00000531951 973 ntTSL 335.36■■■■□ 3.253e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-214ENST00000529693 684 ntTSL 233.51■■■□□ 2.953e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-212ENST00000528320 922 ntTSL 231.28■■■□□ 2.63e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-221ENST00000533162 761 ntTSL 329.33■■■□□ 2.293e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-215ENST00000529999 867 ntTSL 329.17■■■□□ 2.263e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC24.6■■□□□ 1.533e-7■□□□□ 10.7
PABPN1Q86U42 INTS10-209ENST00000521008 572 ntTSL 321.92■■□□□ 1.13e-7■□□□□ 10.7
PABPN1Q86U42 PUF60-213ENST00000528999 431 ntTSL 317.34■□□□□ 0.373e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-212ENST00000489572 1599 ntTSL 1 (best)17.23■□□□□ 0.353e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-211ENST00000470366 1186 ntTSL 516.03■□□□□ 0.163e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC15.49■□□□□ 0.073e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-207ENST00000373729 870 ntTSL 3 BASIC15.21■□□□□ 0.033e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC13.97□□□□□ -0.173e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.553e-7■□□□□ 10.7
PABPN1Q86U42 MRRF-210ENST00000467864 867 ntTSL 511.42□□□□□ -0.583e-7■□□□□ 10.7
PABPN1Q86U42 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC38.77■■■■□ 3.81e-6■□□□□ 10.7
PABPN1Q86U42 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.321e-6■□□□□ 10.7
PABPN1Q86U42 MAPK8IP3-205ENST00000562042 330 ntTSL 326.82■■□□□ 1.881e-10■□□□□ 10.7
PABPN1Q86U42 TMEM94-209ENST00000579208 3543 ntTSL 5 BASIC19.44■□□□□ 0.74e-7■□□□□ 10.7
PABPN1Q86U42 RBM39-235ENST00000490354 436 ntTSL 213.28□□□□□ -0.285e-16■□□□□ 10.7
PABPN1Q86U42 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.713e-8■□□□□ 10.7
PABPN1Q86U42 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.013e-8■□□□□ 10.7
PABPN1Q86U42 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.73e-8■□□□□ 10.7
PABPN1Q86U42 ECHDC2-222ENST00000539680 5817 nt12.36□□□□□ -0.438e-7■□□□□ 10.7
PABPN1Q86U42 RBM5-224ENST00000493993 476 ntTSL 211.91□□□□□ -0.52e-12■□□□□ 10.7
PABPN1Q86U42 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC30.62■■■□□ 2.495e-10■□□□□ 10.7
PABPN1Q86U42 TCF25-217ENST00000566158 373 ntTSL 328.62■■■□□ 2.175e-19■□□□□ 10.7
PABPN1Q86U42 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.285e-10■□□□□ 10.7
PABPN1Q86U42 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.991e-6■□□□□ 10.7
PABPN1Q86U42 FKBP10-204ENST00000464180 1129 ntTSL 245.57■■■■■ 4.893e-8■□□□□ 10.7
PABPN1Q86U42 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.473e-8■□□□□ 10.7
PABPN1Q86U42 FKBP10-206ENST00000489591 2826 ntTSL 228.89■■■□□ 2.223e-8■□□□□ 10.7
PABPN1Q86U42 FKBP10-203ENST00000455106 1965 ntTSL 224.58■■□□□ 1.533e-8■□□□□ 10.7
PABPN1Q86U42 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.663e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-209ENST00000535641 2627 ntTSL 222.27■■□□□ 1.163e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC19.72■□□□□ 0.753e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-214ENST00000539079 1715 ntTSL 1 (best)18.46■□□□□ 0.553e-6■□□□□ 10.7
PABPN1Q86U42 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC15.47■□□□□ 0.073e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-205ENST00000534976 3165 ntTSL 515.23■□□□□ 0.033e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-219ENST00000544314 1508 ntTSL 215.14■□□□□ 0.013e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC13.16□□□□□ -0.33e-6■□□□□ 10.7
PABPN1Q86U42 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC13.16□□□□□ -0.33e-6■□□□□ 10.7
PABPN1Q86U42 LAMA5-206ENST00000468786 325 ntTSL 221.9■■□□□ 1.14e-10■□□□□ 10.7
PABPN1Q86U42 DBN1-204ENST00000467054 793 ntTSL 225.95■■□□□ 1.744e-8■□□□□ 10.7
PABPN1Q86U42 EWSR1-205ENST00000360091 1289 ntTSL 539.74■■■■□ 3.958e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-218ENST00000483629 1818 ntTSL 531.66■■■□□ 2.668e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.558e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC29.72■■■□□ 2.358e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.218e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC27.98■■■□□ 2.078e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC27.36■■□□□ 1.978e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-221ENST00000610553 2300 ntTSL 226.7■■□□□ 1.868e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC26.09■■□□□ 1.778e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.638e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-215ENST00000469669 2630 ntTSL 224.44■■□□□ 1.58e-9■□□□□ 10.7
PABPN1Q86U42 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)13.09□□□□□ -0.318e-9■□□□□ 10.7
PABPN1Q86U42 CFI-207ENST00000618244 1345 ntTSL 5 BASIC16.07■□□□□ 0.165e-8■□□□□ 10.7
PABPN1Q86U42 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.185e-8■□□□□ 10.7
PABPN1Q86U42 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.635e-8■□□□□ 10.7
PABPN1Q86U42 CFI-203ENST00000504853 2368 ntTSL 210.2□□□□□ -0.785e-8■□□□□ 10.7
PABPN1Q86U42 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.875e-8■□□□□ 10.7
PABPN1Q86U42 ENTPD6-215ENST00000471478 991 ntTSL 540.7■■■■■ 4.114e-6■□□□□ 10.7
PABPN1Q86U42 ENTPD6-213ENST00000447877 932 ntTSL 538.17■■■■□ 3.74e-6■□□□□ 10.7
PABPN1Q86U42 PNN-202ENST00000553331 656 ntTSL 3 BASIC36.57■■■■□ 3.444e-6■□□□□ 10.7
PABPN1Q86U42 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.924e-10■□□□□ 10.7
PABPN1Q86U42 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC32.64■■■□□ 2.824e-10■□□□□ 10.7
PABPN1Q86U42 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC32.03■■■□□ 2.724e-10■□□□□ 10.7
PABPN1Q86U42 RELA-227ENST00000615805 2236 ntTSL 5 BASIC30.13■■■□□ 2.414e-10■□□□□ 10.7
PABPN1Q86U42 RELA-208ENST00000526283 2004 ntTSL 523.84■■□□□ 1.414e-10■□□□□ 10.7
PABPN1Q86U42 RELA-217ENST00000531484 2251 ntTSL 218.18■□□□□ 0.54e-10■□□□□ 10.7
PABPN1Q86U42 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC17.06■□□□□ 0.324e-10■□□□□ 10.7
PABPN1Q86U42 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.174e-6■□□□□ 10.7
PABPN1Q86U42 EIF3G-208ENST00000589454 873 ntTSL 522.95■■□□□ 1.262e-7■□□□□ 10.7
PABPN1Q86U42 TMC6-213ENST00000589933 580 ntTSL 343.58■■■■■ 4.571e-8■□□□□ 10.7
PABPN1Q86U42 KHK-206ENST00000490823 1396 ntTSL 537.11■■■■□ 3.537e-10■□□□□ 10.7
PABPN1Q86U42 KHK-204ENST00000464371 1042 ntTSL 1 (best)32.4■■■□□ 2.787e-10■□□□□ 10.7
PABPN1Q86U42 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC26.15■■□□□ 1.787e-10■□□□□ 10.7
PABPN1Q86U42 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.737e-10■□□□□ 10.7
PABPN1Q86U42 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC24.51■■□□□ 1.512e-7■□□□□ 10.7
PABPN1Q86U42 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC22.76■■□□□ 1.232e-7■□□□□ 10.7
PABPN1Q86U42 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.12e-7■□□□□ 10.7
PABPN1Q86U42 DDX39B-210ENST00000431908 914 ntTSL 524.65■■□□□ 1.545e-19■□□□□ 10.7
PABPN1Q86U42 DDX39B-220ENST00000482195 1232 ntTSL 221.91■■□□□ 1.15e-19■□□□□ 10.7
PABPN1Q86U42 FUS-208ENST00000564766 791 ntTSL 211.08□□□□□ -0.641e-14■□□□□ 10.6
PABPN1Q86U42 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC55.26■■■■■ 6.442e-13■□□□□ 10.6
PABPN1Q86U42 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.472e-13■□□□□ 10.6
PABPN1Q86U42 GDPD5-217ENST00000534322 527 ntTSL 320.75■□□□□ 0.914e-8■□□□□ 10.6
Retrieved 100 of 8,254 protein–RNA pairs in 49.2 ms