RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
PUF60-221ENST00000533162 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
PUF60-221ENST00000533162 ABCC9O60706 1549 aa31.34■■■□□ 2.61
PUF60-221ENST00000533162 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
PUF60-221ENST00000533162 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
PUF60-221ENST00000533162 NACADO15069 1562 aa30.11■■■□□ 2.41
PUF60-221ENST00000533162 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
PUF60-221ENST00000533162 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
PUF60-221ENST00000533162 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
PUF60-221ENST00000533162 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.293e-7■□□□□ 10.7
PUF60-221ENST00000533162 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
PUF60-221ENST00000533162 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
PUF60-221ENST00000533162 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
PUF60-221ENST00000533162 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
PUF60-221ENST00000533162 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
PUF60-221ENST00000533162 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
PUF60-221ENST00000533162 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
PUF60-221ENST00000533162 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
PUF60-221ENST00000533162 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
PUF60-221ENST00000533162 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
PUF60-221ENST00000533162 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
PUF60-221ENST00000533162 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
PUF60-221ENST00000533162 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.04
PUF60-221ENST00000533162 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
PUF60-221ENST00000533162 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
PUF60-221ENST00000533162 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
PUF60-221ENST00000533162 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
PUF60-221ENST00000533162 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
PUF60-221ENST00000533162 WIZO95785 1651 aa27.3■■□□□ 1.96
PUF60-221ENST00000533162 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
PUF60-221ENST00000533162 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
PUF60-221ENST00000533162 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
PUF60-221ENST00000533162 NESP48681 1621 aa27.05■■□□□ 1.92
PUF60-221ENST00000533162 CADPSQ9ULU8 1353 aa27.01■■□□□ 1.91
PUF60-221ENST00000533162 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
PUF60-221ENST00000533162 CUX2O14529 1486 aa26.83■■□□□ 1.89
PUF60-221ENST00000533162 CFTRP13569 1480 aa26.79■■□□□ 1.88
PUF60-221ENST00000533162 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
PUF60-221ENST00000533162 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
PUF60-221ENST00000533162 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
PUF60-221ENST00000533162 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
PUF60-221ENST00000533162 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
PUF60-221ENST00000533162 THOC2Q8NI27 1593 aaKnown RBP26.62■■□□□ 1.85
PUF60-221ENST00000533162 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
PUF60-221ENST00000533162 WDR62O43379 1518 aa26.47■■□□□ 1.83
PUF60-221ENST00000533162 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
PUF60-221ENST00000533162 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.81
PUF60-221ENST00000533162 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
PUF60-221ENST00000533162 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
PUF60-221ENST00000533162 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
PUF60-221ENST00000533162 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
PUF60-221ENST00000533162 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
PUF60-221ENST00000533162 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
PUF60-221ENST00000533162 SOGA1O94964 1423 aa25.95■■□□□ 1.74
PUF60-221ENST00000533162 CUX1P39880 1505 aa25.93■■□□□ 1.74
PUF60-221ENST00000533162 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
PUF60-221ENST00000533162 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
PUF60-221ENST00000533162 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
PUF60-221ENST00000533162 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
PUF60-221ENST00000533162 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
PUF60-221ENST00000533162 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
PUF60-221ENST00000533162 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.721e-12■■■■■ 58
PUF60-221ENST00000533162 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
PUF60-221ENST00000533162 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
PUF60-221ENST00000533162 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
PUF60-221ENST00000533162 TOP2BQ02880 1626 aa25.72■■□□□ 1.71
PUF60-221ENST00000533162 BIVM-ERCC5R4GMW8 1640 aa25.67■■□□□ 1.7
PUF60-221ENST00000533162 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
PUF60-221ENST00000533162 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
PUF60-221ENST00000533162 FBLN2P98095 1184 aa25.64■■□□□ 1.7
PUF60-221ENST00000533162 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
PUF60-221ENST00000533162 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
PUF60-221ENST00000533162 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
PUF60-221ENST00000533162 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
PUF60-221ENST00000533162 SNAPC4Q5SXM2 1469 aa25.56■■□□□ 1.68
PUF60-221ENST00000533162 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
PUF60-221ENST00000533162 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
PUF60-221ENST00000533162 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
PUF60-221ENST00000533162 CHD1O14646 1710 aa25.42■■□□□ 1.66
PUF60-221ENST00000533162 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
PUF60-221ENST00000533162 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
PUF60-221ENST00000533162 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
PUF60-221ENST00000533162 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
PUF60-221ENST00000533162 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
PUF60-221ENST00000533162 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
PUF60-221ENST00000533162 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
PUF60-221ENST00000533162 IGF1RP08069 1367 aa25.21■■□□□ 1.63
PUF60-221ENST00000533162 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
PUF60-221ENST00000533162 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
PUF60-221ENST00000533162 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
PUF60-221ENST00000533162 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
PUF60-221ENST00000533162 NUP160Q12769 1436 aa25.14■■□□□ 1.62
PUF60-221ENST00000533162 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
PUF60-221ENST00000533162 CUL7Q14999 1698 aa25.1■■□□□ 1.61
PUF60-221ENST00000533162 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
PUF60-221ENST00000533162 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
PUF60-221ENST00000533162 JPH4Q96JJ6 628 aa25■■□□□ 1.59
PUF60-221ENST00000533162 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
PUF60-221ENST00000533162 KIAA0586Q9BVV6 1533 aa24.94■■□□□ 1.58
PUF60-221ENST00000533162 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms