RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-215ENST00000529999 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.1
PUF60-215ENST00000529999 ABCC9O60706 1549 aa31.28■■■□□ 2.6
PUF60-215ENST00000529999 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
PUF60-215ENST00000529999 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
PUF60-215ENST00000529999 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
PUF60-215ENST00000529999 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
PUF60-215ENST00000529999 NACADO15069 1562 aa29.36■■■□□ 2.29
PUF60-215ENST00000529999 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.263e-7■□□□□ 10.7
PUF60-215ENST00000529999 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PUF60-215ENST00000529999 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
PUF60-215ENST00000529999 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
PUF60-215ENST00000529999 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
PUF60-215ENST00000529999 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
PUF60-215ENST00000529999 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
PUF60-215ENST00000529999 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
PUF60-215ENST00000529999 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.1
PUF60-215ENST00000529999 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
PUF60-215ENST00000529999 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
PUF60-215ENST00000529999 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
PUF60-215ENST00000529999 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
PUF60-215ENST00000529999 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
PUF60-215ENST00000529999 CUX2O14529 1486 aa27.02■■□□□ 1.92
PUF60-215ENST00000529999 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
PUF60-215ENST00000529999 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
PUF60-215ENST00000529999 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
PUF60-215ENST00000529999 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
PUF60-215ENST00000529999 NESP48681 1621 aa26.77■■□□□ 1.88
PUF60-215ENST00000529999 BAZ1BQ9UIG0 1483 aaKnown RBP26.76■■□□□ 1.87
PUF60-215ENST00000529999 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PUF60-215ENST00000529999 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
PUF60-215ENST00000529999 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
PUF60-215ENST00000529999 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
PUF60-215ENST00000529999 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
PUF60-215ENST00000529999 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
PUF60-215ENST00000529999 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
PUF60-215ENST00000529999 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
PUF60-215ENST00000529999 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
PUF60-215ENST00000529999 WIZO95785 1651 aa26.18■■□□□ 1.78
PUF60-215ENST00000529999 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
PUF60-215ENST00000529999 WDR62O43379 1518 aa26.09■■□□□ 1.77
PUF60-215ENST00000529999 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
PUF60-215ENST00000529999 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
PUF60-215ENST00000529999 FANCD2Q9BXW9 1451 aa26.02■■□□□ 1.76
PUF60-215ENST00000529999 CFTRP13569 1480 aa25.95■■□□□ 1.74
PUF60-215ENST00000529999 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
PUF60-215ENST00000529999 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
PUF60-215ENST00000529999 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
PUF60-215ENST00000529999 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
PUF60-215ENST00000529999 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
PUF60-215ENST00000529999 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
PUF60-215ENST00000529999 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
PUF60-215ENST00000529999 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
PUF60-215ENST00000529999 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
PUF60-215ENST00000529999 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
PUF60-215ENST00000529999 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
PUF60-215ENST00000529999 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
PUF60-215ENST00000529999 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
PUF60-215ENST00000529999 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
PUF60-215ENST00000529999 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
PUF60-215ENST00000529999 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
PUF60-215ENST00000529999 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
PUF60-215ENST00000529999 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.641e-6■■■■■ 58
PUF60-215ENST00000529999 FBLN2P98095 1184 aa25.3■■□□□ 1.64
PUF60-215ENST00000529999 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
PUF60-215ENST00000529999 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
PUF60-215ENST00000529999 SOGA1O94964 1423 aa25.16■■□□□ 1.62
PUF60-215ENST00000529999 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
PUF60-215ENST00000529999 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
PUF60-215ENST00000529999 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
PUF60-215ENST00000529999 CHD1O14646 1710 aa25.14■■□□□ 1.61
PUF60-215ENST00000529999 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
PUF60-215ENST00000529999 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
PUF60-215ENST00000529999 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
PUF60-215ENST00000529999 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
PUF60-215ENST00000529999 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
PUF60-215ENST00000529999 CUX1P39880 1505 aa24.93■■□□□ 1.58
PUF60-215ENST00000529999 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
PUF60-215ENST00000529999 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
PUF60-215ENST00000529999 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
PUF60-215ENST00000529999 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
PUF60-215ENST00000529999 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
PUF60-215ENST00000529999 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
PUF60-215ENST00000529999 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
PUF60-215ENST00000529999 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
PUF60-215ENST00000529999 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
PUF60-215ENST00000529999 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
PUF60-215ENST00000529999 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
PUF60-215ENST00000529999 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
PUF60-215ENST00000529999 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
PUF60-215ENST00000529999 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
PUF60-215ENST00000529999 NUP160Q12769 1436 aa24.49■■□□□ 1.51
PUF60-215ENST00000529999 ERCC6L2Q5T890 1561 aa24.48■■□□□ 1.51
PUF60-215ENST00000529999 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
PUF60-215ENST00000529999 ADAMTS12P58397 1594 aa24.47■■□□□ 1.51
PUF60-215ENST00000529999 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
PUF60-215ENST00000529999 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
PUF60-215ENST00000529999 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
PUF60-215ENST00000529999 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
PUF60-215ENST00000529999 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PUF60-215ENST00000529999 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms