RNA–Protein interactions for RNA: ENST00000394315.3

MRRF-208, Transcript of mitochondrial ribosome recycling factor, humanhuman

TSL 1 (best) BASIC

Gene MRRF, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRF-208ENST00000394315 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
MRRF-208ENST00000394315 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
MRRF-208ENST00000394315 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
MRRF-208ENST00000394315 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
MRRF-208ENST00000394315 FOXD1Q16676 465 aa20.42■□□□□ 0.86
MRRF-208ENST00000394315 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
MRRF-208ENST00000394315 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
MRRF-208ENST00000394315 ADRA2BP18089 450 aa19.3■□□□□ 0.68
MRRF-208ENST00000394315 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
MRRF-208ENST00000394315 MSH5O43196 834 aa19.01■□□□□ 0.63
MRRF-208ENST00000394315 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
MRRF-208ENST00000394315 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
MRRF-208ENST00000394315 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
MRRF-208ENST00000394315 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
MRRF-208ENST00000394315 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
MRRF-208ENST00000394315 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
MRRF-208ENST00000394315 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
MRRF-208ENST00000394315 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
MRRF-208ENST00000394315 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
MRRF-208ENST00000394315 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
MRRF-208ENST00000394315 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
MRRF-208ENST00000394315 KCNA4P22459 653 aa16.69■□□□□ 0.26
MRRF-208ENST00000394315 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
MRRF-208ENST00000394315 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
MRRF-208ENST00000394315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■□□□ 11.4
MRRF-208ENST00000394315 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
MRRF-208ENST00000394315 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
MRRF-208ENST00000394315 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
MRRF-208ENST00000394315 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
MRRF-208ENST00000394315 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
MRRF-208ENST00000394315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
MRRF-208ENST00000394315 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
MRRF-208ENST00000394315 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
MRRF-208ENST00000394315 CAPN15O75808 1086 aa15.5■□□□□ 0.07
MRRF-208ENST00000394315 APLP2Q06481 763 aa15.49■□□□□ 0.07
MRRF-208ENST00000394315 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
MRRF-208ENST00000394315 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
MRRF-208ENST00000394315 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
MRRF-208ENST00000394315 ZBTB22O15209 634 aa15.33■□□□□ 0.05
MRRF-208ENST00000394315 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
MRRF-208ENST00000394315 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
MRRF-208ENST00000394315 DSG3P32926 999 aa15.31■□□□□ 0.04
MRRF-208ENST00000394315 ABCB7O75027 752 aa15.14■□□□□ 0.01
MRRF-208ENST00000394315 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
MRRF-208ENST00000394315 ATXN8OSP0DMR3 200 aa15.01□□□□□ -0.01
MRRF-208ENST00000394315 POLA2Q14181 598 aa15.01□□□□□ -0.01
MRRF-208ENST00000394315 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
MRRF-208ENST00000394315 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
MRRF-208ENST00000394315 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
MRRF-208ENST00000394315 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
MRRF-208ENST00000394315 FBLN2P98095 1184 aa14.51□□□□□ -0.09
MRRF-208ENST00000394315 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
MRRF-208ENST00000394315 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
MRRF-208ENST00000394315 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
MRRF-208ENST00000394315 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
MRRF-208ENST00000394315 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
MRRF-208ENST00000394315 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
MRRF-208ENST00000394315 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
MRRF-208ENST00000394315 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
MRRF-208ENST00000394315 POTEHQ6S545 545 aa14.17□□□□□ -0.14
MRRF-208ENST00000394315 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
MRRF-208ENST00000394315 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
MRRF-208ENST00000394315 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
MRRF-208ENST00000394315 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.173e-7■□□□□ 10.7
MRRF-208ENST00000394315 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
MRRF-208ENST00000394315 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
MRRF-208ENST00000394315 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
MRRF-208ENST00000394315 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
MRRF-208ENST00000394315 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
MRRF-208ENST00000394315 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
MRRF-208ENST00000394315 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
MRRF-208ENST00000394315 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
MRRF-208ENST00000394315 PROM2Q8N271 834 aa13.6□□□□□ -0.23
MRRF-208ENST00000394315 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
MRRF-208ENST00000394315 HAX1O00165 279 aa13.59□□□□□ -0.23
MRRF-208ENST00000394315 FKBP8Q14318 412 aa13.54□□□□□ -0.24
MRRF-208ENST00000394315 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
MRRF-208ENST00000394315 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
MRRF-208ENST00000394315 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
MRRF-208ENST00000394315 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
MRRF-208ENST00000394315 EVX2Q03828 476 aa13.39□□□□□ -0.27
MRRF-208ENST00000394315 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
MRRF-208ENST00000394315 MIER1Q8N108 512 aa13.28□□□□□ -0.28
MRRF-208ENST00000394315 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
MRRF-208ENST00000394315 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
MRRF-208ENST00000394315 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
MRRF-208ENST00000394315 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
MRRF-208ENST00000394315 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
MRRF-208ENST00000394315 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
MRRF-208ENST00000394315 GABBR2O75899 941 aa13.13□□□□□ -0.31
MRRF-208ENST00000394315 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
MRRF-208ENST00000394315 CLCN6P51797 869 aa13.09□□□□□ -0.31
MRRF-208ENST00000394315 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
MRRF-208ENST00000394315 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
MRRF-208ENST00000394315 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
MRRF-208ENST00000394315 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
MRRF-208ENST00000394315 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
MRRF-208ENST00000394315 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
MRRF-208ENST00000394315 NUBP1P53384 320 aa12.93□□□□□ -0.34
MRRF-208ENST00000394315 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms