Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 YIF1A-204ENST00000431556 619 ntTSL 214.41□□□□□ -0.11e-11■■■□□ 16.5
LARP4Q71RC2 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC11.04□□□□□ -0.641e-11■■■□□ 16.5
LARP4Q71RC2 PSMB6-202ENST00000571309 583 ntTSL 312.5□□□□□ -0.414e-11■■■□□ 16.5
LARP4Q71RC2 JPT1-210ENST00000580380 411 ntTSL 514.07□□□□□ -0.169e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.52■□□□□ 0.553e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.13e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.233e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.273e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.443e-8■■■□□ 16.5
LARP4Q71RC2 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.753e-8■■■□□ 16.5
LARP4Q71RC2 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 56.49□□□□□ -1.373e-8■■■□□ 16.5
LARP4Q71RC2 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.423e-8■■■□□ 16.5
LARP4Q71RC2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.911e-7■■■□□ 16.5
LARP4Q71RC2 CD151-220ENST00000532045 1803 ntTSL 520.85■□□□□ 0.931e-7■■■□□ 16.5
LARP4Q71RC2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.531e-7■■■□□ 16.5
LARP4Q71RC2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.461e-7■■■□□ 16.5
LARP4Q71RC2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.311e-7■■■□□ 16.5
LARP4Q71RC2 CD151-218ENST00000530726 1407 ntTSL 512.24□□□□□ -0.451e-7■■■□□ 16.5
LARP4Q71RC2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.622e-7■■■□□ 16.5
LARP4Q71RC2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -22e-7■■■□□ 16.5
LARP4Q71RC2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.022e-7■■■□□ 16.5
LARP4Q71RC2 UNG-203ENST00000446767 2016 ntTSL 1 (best)19.34■□□□□ 0.697e-7■■■□□ 16.5
LARP4Q71RC2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.547e-7■■■□□ 16.5
LARP4Q71RC2 UNG-204ENST00000539287 2234 ntTSL 517.2■□□□□ 0.347e-7■■■□□ 16.5
LARP4Q71RC2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.137e-7■■■□□ 16.5
LARP4Q71RC2 SEPT9-245ENST00000592481 1291 ntTSL 519.72■□□□□ 0.752e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-227ENST00000590059 670 ntTSL 519.7■□□□□ 0.742e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-219ENST00000588575 559 ntTSL 418.66■□□□□ 0.582e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-215ENST00000586521 601 ntTSL 416.6■□□□□ 0.252e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-221ENST00000588958 879 ntTSL 215.31■□□□□ 0.042e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.25■□□□□ 0.032e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-210ENST00000585929 906 ntTSL 413.89□□□□□ -0.192e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.46□□□□□ -0.252e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-212ENST00000586128 752 ntTSL 413.3□□□□□ -0.282e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-213ENST00000586433 569 ntTSL 411.63□□□□□ -0.552e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-238ENST00000591472 555 ntTSL 411.3□□□□□ -0.62e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-239ENST00000591704 749 ntTSL 210.7□□□□□ -0.72e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-235ENST00000591020 582 ntTSL 410.34□□□□□ -0.752e-6■■■□□ 16.4
LARP4Q71RC2 SEPT9-234ENST00000590938 611 ntTSL 49.52□□□□□ -0.892e-6■■■□□ 16.4
LARP4Q71RC2 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.33■□□□□ 0.683e-11■■■□□ 16.4
LARP4Q71RC2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.1■□□□□ 0.013e-11■■■□□ 16.4
LARP4Q71RC2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.22□□□□□ -0.133e-11■■■□□ 16.4
LARP4Q71RC2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.173e-11■■■□□ 16.4
LARP4Q71RC2 CBFA2T3-204ENST00000563640 664 ntTSL 214.23□□□□□ -0.131e-6■■■□□ 16.4
LARP4Q71RC2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.129e-14■■■□□ 16.4
LARP4Q71RC2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.19e-14■■■□□ 16.4
LARP4Q71RC2 RPS5-203ENST00000596314 718 ntTSL 514.21□□□□□ -0.131e-13■■■□□ 16.4
LARP4Q71RC2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.339e-14■■■□□ 16.4
LARP4Q71RC2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12□□□□□ -0.499e-14■■■□□ 16.4
LARP4Q71RC2 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.59□□□□□ -0.559e-14■■■□□ 16.4
LARP4Q71RC2 RPL37-202ENST00000504562 505 ntTSL 210.42□□□□□ -0.743e-7■■■□□ 16.4
LARP4Q71RC2 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.2□□□□□ -1.263e-7■■■□□ 16.4
LARP4Q71RC2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.623e-7■■■□□ 16.4
LARP4Q71RC2 TIMM50-219ENST00000602265 786 ntTSL 212.02□□□□□ -0.493e-6■■■□□ 16.4
LARP4Q71RC2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.74■■□□□ 1.554e-8■■■□□ 16.4
LARP4Q71RC2 SSNA1-202ENST00000459860 1170 ntTSL 1 (best)20.04■□□□□ 0.84e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.96■□□□□ 0.794e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.96■□□□□ 0.794e-8■■■□□ 16.4
LARP4Q71RC2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.44e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-206ENST00000421919 687 ntTSL 217.24■□□□□ 0.354e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.24■□□□□ 0.354e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.134e-8■■■□□ 16.4
LARP4Q71RC2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.88□□□□□ -0.034e-8■■■□□ 16.4
LARP4Q71RC2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.134e-8■■■□□ 16.4
LARP4Q71RC2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.224e-8■■■□□ 16.4
LARP4Q71RC2 ARL2-205ENST00000531533 281 ntTSL 212.17□□□□□ -0.464e-8■■■□□ 16.4
LARP4Q71RC2 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.554e-8■■■□□ 16.4
LARP4Q71RC2 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC10.85□□□□□ -0.674e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-208ENST00000472418 688 ntTSL 210.53□□□□□ -0.724e-8■■■□□ 16.4
LARP4Q71RC2 FOXM1-206ENST00000536066 2518 ntTSL 1 (best)8.76□□□□□ -1.014e-8■■■□□ 16.4
LARP4Q71RC2 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.79□□□□□ -1.164e-8■■■□□ 16.4
LARP4Q71RC2 DCTN3-210ENST00000479399 3023 ntTSL 1 (best)7.51□□□□□ -1.214e-8■■■□□ 16.4
LARP4Q71RC2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.364e-8■■■□□ 16.4
LARP4Q71RC2 FAM96A-204ENST00000558779 494 ntTSL 55.85□□□□□ -1.474e-8■■■□□ 16.4
LARP4Q71RC2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.222e-9■■■□□ 16.4
LARP4Q71RC2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.11e-6■■■□□ 16.4
LARP4Q71RC2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.32■□□□□ 0.841e-6■■■□□ 16.4
LARP4Q71RC2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.68■□□□□ 0.742e-18■■■□□ 16.4
LARP4Q71RC2 RPS6-202ENST00000380381 892 ntTSL 2 BASIC8.74□□□□□ -1.014e-18■■■□□ 16.4
LARP4Q71RC2 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.082e-18■■■□□ 16.4
LARP4Q71RC2 RPS24-208ENST00000475468 623 ntTSL 517.16■□□□□ 0.341e-60■■■□□ 16.4
LARP4Q71RC2 RPS24-207ENST00000466129 661 ntTSL 28.47□□□□□ -1.051e-60■■■□□ 16.4
LARP4Q71RC2 NPM3-204ENST00000474993 755 ntTSL 219.53■□□□□ 0.723e-7■■■□□ 16.4
LARP4Q71RC2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.43e-7■■■□□ 16.4
LARP4Q71RC2 CD151-205ENST00000525181 364 ntTSL 37.98□□□□□ -1.136e-8■■■□□ 16.4
LARP4Q71RC2 SNU13-205ENST00000463675 786 ntTSL 313.92□□□□□ -0.183e-7■■■□□ 16.4
LARP4Q71RC2 CRLF1-203ENST00000594325 1020 ntTSL 320.82■□□□□ 0.922e-11■■■□□ 16.3
LARP4Q71RC2 PPP4C-212ENST00000567828 742 ntTSL 320.68■□□□□ 0.93e-7■■■□□ 16.3
LARP4Q71RC2 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.2□□□□□ -0.943e-7■■■□□ 16.3
LARP4Q71RC2 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.518e-12■■■□□ 16.3
LARP4Q71RC2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.261e-7■■■□□ 16.3
LARP4Q71RC2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.261e-7■■■□□ 16.3
LARP4Q71RC2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.11■□□□□ 0.172e-11■■■□□ 16.3
LARP4Q71RC2 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC11.02□□□□□ -0.652e-11■■■□□ 16.3
LARP4Q71RC2 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.712e-11■■■□□ 16.3
LARP4Q71RC2 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC10.44□□□□□ -0.742e-11■■■□□ 16.3
LARP4Q71RC2 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC9.29□□□□□ -0.922e-11■■■□□ 16.3
LARP4Q71RC2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.19□□□□□ -0.33e-7■■■□□ 16.3
LARP4Q71RC2 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.533e-7■■■□□ 16.3
LARP4Q71RC2 CLUH-211ENST00000575014 4959 ntAPPRIS ALT2 TSL 517.23■□□□□ 0.354e-8■■■□□ 16.3
Retrieved 100 of 15,922 protein–RNA pairs in 177.6 ms