RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
PSMB6-202ENST00000571309 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
PSMB6-202ENST00000571309 ABCC9O60706 1549 aa30.76■■■□□ 2.51
PSMB6-202ENST00000571309 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
PSMB6-202ENST00000571309 NACADO15069 1562 aa29.2■■■□□ 2.26
PSMB6-202ENST00000571309 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
PSMB6-202ENST00000571309 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PSMB6-202ENST00000571309 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
PSMB6-202ENST00000571309 UNC13AQ9UPW8 1703 aa28.7■■■□□ 2.19
PSMB6-202ENST00000571309 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
PSMB6-202ENST00000571309 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
PSMB6-202ENST00000571309 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
PSMB6-202ENST00000571309 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
PSMB6-202ENST00000571309 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
PSMB6-202ENST00000571309 SCRIBQ14160 1630 aa28.14■■■□□ 2.09
PSMB6-202ENST00000571309 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
PSMB6-202ENST00000571309 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
PSMB6-202ENST00000571309 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
PSMB6-202ENST00000571309 NCAPD3P42695 1498 aa26.95■■□□□ 1.91
PSMB6-202ENST00000571309 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
PSMB6-202ENST00000571309 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
PSMB6-202ENST00000571309 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
PSMB6-202ENST00000571309 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
PSMB6-202ENST00000571309 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PSMB6-202ENST00000571309 PEG3Q9GZU2 1588 aa26.64■■□□□ 1.86
PSMB6-202ENST00000571309 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
PSMB6-202ENST00000571309 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
PSMB6-202ENST00000571309 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
PSMB6-202ENST00000571309 CUX2O14529 1486 aa26.5■■□□□ 1.83
PSMB6-202ENST00000571309 NESP48681 1621 aa26.47■■□□□ 1.83
PSMB6-202ENST00000571309 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
PSMB6-202ENST00000571309 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.8
PSMB6-202ENST00000571309 WIZO95785 1651 aa26.24■■□□□ 1.79
PSMB6-202ENST00000571309 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
PSMB6-202ENST00000571309 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
PSMB6-202ENST00000571309 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
PSMB6-202ENST00000571309 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PSMB6-202ENST00000571309 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
PSMB6-202ENST00000571309 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
PSMB6-202ENST00000571309 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
PSMB6-202ENST00000571309 WDR62O43379 1518 aa25.88■■□□□ 1.73
PSMB6-202ENST00000571309 CFTRP13569 1480 aa25.86■■□□□ 1.73
PSMB6-202ENST00000571309 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
PSMB6-202ENST00000571309 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
PSMB6-202ENST00000571309 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
PSMB6-202ENST00000571309 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
PSMB6-202ENST00000571309 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
PSMB6-202ENST00000571309 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
PSMB6-202ENST00000571309 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
PSMB6-202ENST00000571309 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
PSMB6-202ENST00000571309 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
PSMB6-202ENST00000571309 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
PSMB6-202ENST00000571309 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
PSMB6-202ENST00000571309 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
PSMB6-202ENST00000571309 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
PSMB6-202ENST00000571309 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
PSMB6-202ENST00000571309 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
PSMB6-202ENST00000571309 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.64e-8■■■■■ 43
PSMB6-202ENST00000571309 RAD54L2Q9Y4B4 1467 aa24.99■■□□□ 1.59
PSMB6-202ENST00000571309 SOGA1O94964 1423 aa24.98■■□□□ 1.59
PSMB6-202ENST00000571309 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
PSMB6-202ENST00000571309 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
PSMB6-202ENST00000571309 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
PSMB6-202ENST00000571309 CUX1P39880 1505 aa24.96■■□□□ 1.59
PSMB6-202ENST00000571309 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
PSMB6-202ENST00000571309 CHD1O14646 1710 aa24.92■■□□□ 1.58
PSMB6-202ENST00000571309 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
PSMB6-202ENST00000571309 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
PSMB6-202ENST00000571309 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
PSMB6-202ENST00000571309 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
PSMB6-202ENST00000571309 FBLN2P98095 1184 aa24.82■■□□□ 1.56
PSMB6-202ENST00000571309 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
PSMB6-202ENST00000571309 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
PSMB6-202ENST00000571309 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
PSMB6-202ENST00000571309 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
PSMB6-202ENST00000571309 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
PSMB6-202ENST00000571309 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
PSMB6-202ENST00000571309 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
PSMB6-202ENST00000571309 CYB5RLQ6IPT4 315 aa24.67■■□□□ 1.54
PSMB6-202ENST00000571309 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
PSMB6-202ENST00000571309 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
PSMB6-202ENST00000571309 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
PSMB6-202ENST00000571309 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
PSMB6-202ENST00000571309 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
PSMB6-202ENST00000571309 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
PSMB6-202ENST00000571309 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
PSMB6-202ENST00000571309 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
PSMB6-202ENST00000571309 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
PSMB6-202ENST00000571309 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
PSMB6-202ENST00000571309 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
PSMB6-202ENST00000571309 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
PSMB6-202ENST00000571309 NUP160Q12769 1436 aa24.36■■□□□ 1.49
PSMB6-202ENST00000571309 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
PSMB6-202ENST00000571309 TRHP20396 242 aaPredicted RBP24.34■■□□□ 1.49
PSMB6-202ENST00000571309 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
PSMB6-202ENST00000571309 SHROOM2Q13796 1616 aa24.25■■□□□ 1.47
PSMB6-202ENST00000571309 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
PSMB6-202ENST00000571309 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
PSMB6-202ENST00000571309 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
PSMB6-202ENST00000571309 IGF1RP08069 1367 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms