RNA–Protein interactions for RNA: ENST00000479399.5

DCTN3-210, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best)

Gene DCTN3, Length 3,023 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-210ENST00000479399 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
DCTN3-210ENST00000479399 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
DCTN3-210ENST00000479399 ABCC9O60706 1549 aa14.15□□□□□ -0.14
DCTN3-210ENST00000479399 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
DCTN3-210ENST00000479399 NACADO15069 1562 aa13.71□□□□□ -0.21
DCTN3-210ENST00000479399 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
DCTN3-210ENST00000479399 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
DCTN3-210ENST00000479399 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
DCTN3-210ENST00000479399 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
DCTN3-210ENST00000479399 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
DCTN3-210ENST00000479399 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
DCTN3-210ENST00000479399 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
DCTN3-210ENST00000479399 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
DCTN3-210ENST00000479399 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
DCTN3-210ENST00000479399 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
DCTN3-210ENST00000479399 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
DCTN3-210ENST00000479399 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
DCTN3-210ENST00000479399 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
DCTN3-210ENST00000479399 HRCP23327 699 aa12.73□□□□□ -0.37
DCTN3-210ENST00000479399 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
DCTN3-210ENST00000479399 NCAPD3P42695 1498 aa12.61□□□□□ -0.39
DCTN3-210ENST00000479399 HMGXB3Q12766 1538 aa12.56□□□□□ -0.4
DCTN3-210ENST00000479399 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
DCTN3-210ENST00000479399 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
DCTN3-210ENST00000479399 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
DCTN3-210ENST00000479399 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
DCTN3-210ENST00000479399 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
DCTN3-210ENST00000479399 CUX2O14529 1486 aa12.47□□□□□ -0.41
DCTN3-210ENST00000479399 MYT1Q01538 1121 aa12.38□□□□□ -0.43
DCTN3-210ENST00000479399 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
DCTN3-210ENST00000479399 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
DCTN3-210ENST00000479399 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
DCTN3-210ENST00000479399 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
DCTN3-210ENST00000479399 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
DCTN3-210ENST00000479399 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
DCTN3-210ENST00000479399 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
DCTN3-210ENST00000479399 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.46
DCTN3-210ENST00000479399 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.46
DCTN3-210ENST00000479399 NESP48681 1621 aa12.15□□□□□ -0.46
DCTN3-210ENST00000479399 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
DCTN3-210ENST00000479399 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
DCTN3-210ENST00000479399 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
DCTN3-210ENST00000479399 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
DCTN3-210ENST00000479399 WIZO95785 1651 aa12.1□□□□□ -0.47
DCTN3-210ENST00000479399 WDR62O43379 1518 aa12.1□□□□□ -0.47
DCTN3-210ENST00000479399 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
DCTN3-210ENST00000479399 MRC2Q9UBG0 1479 aa12.1□□□□□ -0.47
DCTN3-210ENST00000479399 TOP2AP11388 1531 aaKnown RBP12.09□□□□□ -0.47
DCTN3-210ENST00000479399 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
DCTN3-210ENST00000479399 CFTRP13569 1480 aa12.05□□□□□ -0.48
DCTN3-210ENST00000479399 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
DCTN3-210ENST00000479399 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
DCTN3-210ENST00000479399 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
DCTN3-210ENST00000479399 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
DCTN3-210ENST00000479399 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
DCTN3-210ENST00000479399 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
DCTN3-210ENST00000479399 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
DCTN3-210ENST00000479399 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
DCTN3-210ENST00000479399 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
DCTN3-210ENST00000479399 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
DCTN3-210ENST00000479399 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
DCTN3-210ENST00000479399 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
DCTN3-210ENST00000479399 TOPBP1Q92547 1522 aa11.77□□□□□ -0.53
DCTN3-210ENST00000479399 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
DCTN3-210ENST00000479399 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
DCTN3-210ENST00000479399 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
DCTN3-210ENST00000479399 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
DCTN3-210ENST00000479399 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
DCTN3-210ENST00000479399 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
DCTN3-210ENST00000479399 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
DCTN3-210ENST00000479399 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
DCTN3-210ENST00000479399 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
DCTN3-210ENST00000479399 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
DCTN3-210ENST00000479399 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
DCTN3-210ENST00000479399 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
DCTN3-210ENST00000479399 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
DCTN3-210ENST00000479399 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
DCTN3-210ENST00000479399 CHD1O14646 1710 aa11.57□□□□□ -0.56
DCTN3-210ENST00000479399 SOGA1O94964 1423 aa11.57□□□□□ -0.56
DCTN3-210ENST00000479399 CUX1P39880 1505 aa11.55□□□□□ -0.56
DCTN3-210ENST00000479399 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
DCTN3-210ENST00000479399 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
DCTN3-210ENST00000479399 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
DCTN3-210ENST00000479399 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
DCTN3-210ENST00000479399 SYNJ1O43426 1573 aa11.52□□□□□ -0.57
DCTN3-210ENST00000479399 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
DCTN3-210ENST00000479399 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
DCTN3-210ENST00000479399 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
DCTN3-210ENST00000479399 ABCA5Q8WWZ7 1642 aa11.5□□□□□ -0.57
DCTN3-210ENST00000479399 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
DCTN3-210ENST00000479399 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
DCTN3-210ENST00000479399 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
DCTN3-210ENST00000479399 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
DCTN3-210ENST00000479399 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
DCTN3-210ENST00000479399 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
DCTN3-210ENST00000479399 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
DCTN3-210ENST00000479399 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
DCTN3-210ENST00000479399 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
DCTN3-210ENST00000479399 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
DCTN3-210ENST00000479399 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms