Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC8.63□□□□□ -1.03
MTHFRP42898 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
MTHFRP42898 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.63□□□□□ -1.03
MTHFRP42898 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 TRIM60P19-201ENST00000452879 1462 ntBASIC8.63□□□□□ -1.03
MTHFRP42898 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
MTHFRP42898 AC008937.3-201ENST00000606813 1700 ntBASIC8.63□□□□□ -1.03
MTHFRP42898 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC010680.2-201ENST00000603521 2117 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
MTHFRP42898 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 AL161787.1-201ENST00000401543 174 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AL049758.1-201ENST00000423154 397 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC044836.1-201ENST00000519514 274 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.62□□□□□ -1.03
MTHFRP42898 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC078899.4-201ENST00000593952 1113 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
MTHFRP42898 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 HSPD1P5-201ENST00000511127 1720 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
MTHFRP42898 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.62□□□□□ -1.03
MTHFRP42898 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 AC004491.1-201ENST00000623029 1882 ntBASIC8.62□□□□□ -1.03
MTHFRP42898 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.62□□□□□ -1.03
MTHFRP42898 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MTHFRP42898 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
MTHFRP42898 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MTHFRP42898 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
MTHFRP42898 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.61□□□□□ -1.03
MTHFRP42898 AF228730.7-203ENST00000641436 1804 ntBASIC8.61□□□□□ -1.03
MTHFRP42898 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.61□□□□□ -1.03
MTHFRP42898 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.61□□□□□ -1.03
MTHFRP42898 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.61□□□□□ -1.03
MTHFRP42898 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 AL591543.1-202ENST00000642095 4149 ntBASIC8.61□□□□□ -1.03
MTHFRP42898 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MTHFRP42898 SNORA30B-201ENST00000365319 129 ntBASIC8.61□□□□□ -1.03
MTHFRP42898 BEND6-201ENST00000370745 579 ntTSL 5 BASIC8.61□□□□□ -1.03
MTHFRP42898 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms