RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
FNDC3A-204ENST00000492622 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
FNDC3A-204ENST00000492622 SHROOM4Q9ULL8 1493 aa14.49□□□□□ -0.09
FNDC3A-204ENST00000492622 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
FNDC3A-204ENST00000492622 NISCHQ9Y2I1 1504 aa14.38□□□□□ -0.11
FNDC3A-204ENST00000492622 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.18
FNDC3A-204ENST00000492622 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
FNDC3A-204ENST00000492622 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
FNDC3A-204ENST00000492622 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
FNDC3A-204ENST00000492622 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
FNDC3A-204ENST00000492622 APLP2Q06481 763 aa13.43□□□□□ -0.26
FNDC3A-204ENST00000492622 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
FNDC3A-204ENST00000492622 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
FNDC3A-204ENST00000492622 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
FNDC3A-204ENST00000492622 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
FNDC3A-204ENST00000492622 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
FNDC3A-204ENST00000492622 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
FNDC3A-204ENST00000492622 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
FNDC3A-204ENST00000492622 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
FNDC3A-204ENST00000492622 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
FNDC3A-204ENST00000492622 HRCP23327 699 aa13.07□□□□□ -0.32
FNDC3A-204ENST00000492622 CHIC1Q5VXU3 224 aa13.01□□□□□ -0.33
FNDC3A-204ENST00000492622 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
FNDC3A-204ENST00000492622 ITGAEP38570 1179 aa12.97□□□□□ -0.33
FNDC3A-204ENST00000492622 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
FNDC3A-204ENST00000492622 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
FNDC3A-204ENST00000492622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
FNDC3A-204ENST00000492622 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
FNDC3A-204ENST00000492622 NEFLP07196 543 aa12.79□□□□□ -0.36
FNDC3A-204ENST00000492622 POLR3GLQ9BT43 218 aa12.77□□□□□ -0.37
FNDC3A-204ENST00000492622 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
FNDC3A-204ENST00000492622 MYT1Q01538 1121 aa12.59□□□□□ -0.39
FNDC3A-204ENST00000492622 BCANQ96GW7 911 aa12.57□□□□□ -0.4
FNDC3A-204ENST00000492622 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
FNDC3A-204ENST00000492622 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
FNDC3A-204ENST00000492622 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
FNDC3A-204ENST00000492622 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
FNDC3A-204ENST00000492622 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
FNDC3A-204ENST00000492622 ABCC9O60706 1549 aa12.42□□□□□ -0.42
FNDC3A-204ENST00000492622 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
FNDC3A-204ENST00000492622 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
FNDC3A-204ENST00000492622 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
FNDC3A-204ENST00000492622 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
FNDC3A-204ENST00000492622 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
FNDC3A-204ENST00000492622 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
FNDC3A-204ENST00000492622 ZNF316A6NFI3 1004 aaPredicted RBP12.28□□□□□ -0.44
FNDC3A-204ENST00000492622 ACIN1Q9UKV3 1341 aaKnown RBP12.27□□□□□ -0.45
FNDC3A-204ENST00000492622 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.45
FNDC3A-204ENST00000492622 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
FNDC3A-204ENST00000492622 ANP32CO43423 234 aa12.18□□□□□ -0.46
FNDC3A-204ENST00000492622 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
FNDC3A-204ENST00000492622 FBLN2P98095 1184 aa12.15□□□□□ -0.46
FNDC3A-204ENST00000492622 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
FNDC3A-204ENST00000492622 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
FNDC3A-204ENST00000492622 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
FNDC3A-204ENST00000492622 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
FNDC3A-204ENST00000492622 FKBP8Q14318 412 aa12.08□□□□□ -0.48
FNDC3A-204ENST00000492622 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
FNDC3A-204ENST00000492622 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
FNDC3A-204ENST00000492622 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
FNDC3A-204ENST00000492622 SCRIBQ14160 1630 aa12.05□□□□□ -0.48
FNDC3A-204ENST00000492622 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
FNDC3A-204ENST00000492622 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
FNDC3A-204ENST00000492622 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
FNDC3A-204ENST00000492622 MIER1Q8N108 512 aa12.03□□□□□ -0.48
FNDC3A-204ENST00000492622 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
FNDC3A-204ENST00000492622 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
FNDC3A-204ENST00000492622 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
FNDC3A-204ENST00000492622 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
FNDC3A-204ENST00000492622 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
FNDC3A-204ENST00000492622 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
FNDC3A-204ENST00000492622 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
FNDC3A-204ENST00000492622 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
FNDC3A-204ENST00000492622 NBR1Q14596 966 aa11.88□□□□□ -0.51
FNDC3A-204ENST00000492622 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
FNDC3A-204ENST00000492622 TONSLQ96HA7 1378 aa11.88□□□□□ -0.51
FNDC3A-204ENST00000492622 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
FNDC3A-204ENST00000492622 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
FNDC3A-204ENST00000492622 ARXQ96QS3 562 aa11.81□□□□□ -0.52
FNDC3A-204ENST00000492622 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
FNDC3A-204ENST00000492622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■□□□ 13
FNDC3A-204ENST00000492622 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
FNDC3A-204ENST00000492622 RRP7BPQ9NSQ0 103 aa11.78□□□□□ -0.52
FNDC3A-204ENST00000492622 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.53
FNDC3A-204ENST00000492622 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
FNDC3A-204ENST00000492622 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
FNDC3A-204ENST00000492622 CCDC136Q96JN2 1154 aa11.74□□□□□ -0.53
FNDC3A-204ENST00000492622 CLIP1P30622 1438 aa11.74□□□□□ -0.53
FNDC3A-204ENST00000492622 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
FNDC3A-204ENST00000492622 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
FNDC3A-204ENST00000492622 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
FNDC3A-204ENST00000492622 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
FNDC3A-204ENST00000492622 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
FNDC3A-204ENST00000492622 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
FNDC3A-204ENST00000492622 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
FNDC3A-204ENST00000492622 NEFMP07197 916 aa11.64□□□□□ -0.55
FNDC3A-204ENST00000492622 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
FNDC3A-204ENST00000492622 HSP90AA1P07900 732 aaKnown RBP11.61□□□□□ -0.55
FNDC3A-204ENST00000492622 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
FNDC3A-204ENST00000492622 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms