RNA–Protein interactions for RNA: ENST00000360356.6

PARP9-201, Transcript of poly(ADP-ribose) polymerase family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PARP9, Length 3,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9-201ENST00000360356 NISCHQ9Y2I1 1504 aa17.21■□□□□ 0.35
PARP9-201ENST00000360356 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
PARP9-201ENST00000360356 HRCP23327 699 aa14.99□□□□□ -0.01
PARP9-201ENST00000360356 MYT1Q01538 1121 aa14.88□□□□□ -0.03
PARP9-201ENST00000360356 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
PARP9-201ENST00000360356 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
PARP9-201ENST00000360356 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
PARP9-201ENST00000360356 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
PARP9-201ENST00000360356 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
PARP9-201ENST00000360356 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
PARP9-201ENST00000360356 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.13
PARP9-201ENST00000360356 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.13
PARP9-201ENST00000360356 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
PARP9-201ENST00000360356 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
PARP9-201ENST00000360356 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
PARP9-201ENST00000360356 ABCC9O60706 1549 aa13.98□□□□□ -0.17
PARP9-201ENST00000360356 ACIN1Q9UKV3 1341 aaKnown RBP13.98□□□□□ -0.17
PARP9-201ENST00000360356 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
PARP9-201ENST00000360356 NEUROD1Q13562 356 aa13.94□□□□□ -0.18
PARP9-201ENST00000360356 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
PARP9-201ENST00000360356 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
PARP9-201ENST00000360356 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
PARP9-201ENST00000360356 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
PARP9-201ENST00000360356 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.19
PARP9-201ENST00000360356 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
PARP9-201ENST00000360356 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PARP9-201ENST00000360356 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
PARP9-201ENST00000360356 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
PARP9-201ENST00000360356 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
PARP9-201ENST00000360356 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
PARP9-201ENST00000360356 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
PARP9-201ENST00000360356 NACADO15069 1562 aa13.46□□□□□ -0.25
PARP9-201ENST00000360356 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
PARP9-201ENST00000360356 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
PARP9-201ENST00000360356 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
PARP9-201ENST00000360356 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
PARP9-201ENST00000360356 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
PARP9-201ENST00000360356 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
PARP9-201ENST00000360356 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
PARP9-201ENST00000360356 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
PARP9-201ENST00000360356 APLP2Q06481 763 aa13.36□□□□□ -0.27
PARP9-201ENST00000360356 EEA1Q15075 1411 aa13.25□□□□□ -0.29
PARP9-201ENST00000360356 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
PARP9-201ENST00000360356 WIZO95785 1651 aa13.22□□□□□ -0.29
PARP9-201ENST00000360356 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.3
PARP9-201ENST00000360356 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
PARP9-201ENST00000360356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
PARP9-201ENST00000360356 CECR2Q9BXF3 1484 aa13.15□□□□□ -0.3
PARP9-201ENST00000360356 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
PARP9-201ENST00000360356 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
PARP9-201ENST00000360356 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
PARP9-201ENST00000360356 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
PARP9-201ENST00000360356 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
PARP9-201ENST00000360356 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
PARP9-201ENST00000360356 KIF21BO75037 1637 aa13.05□□□□□ -0.32
PARP9-201ENST00000360356 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
PARP9-201ENST00000360356 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
PARP9-201ENST00000360356 MIER1Q8N108 512 aa13.03□□□□□ -0.32
PARP9-201ENST00000360356 GOLGA3Q08378 1498 aa13□□□□□ -0.33
PARP9-201ENST00000360356 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
PARP9-201ENST00000360356 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
PARP9-201ENST00000360356 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
PARP9-201ENST00000360356 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.33
PARP9-201ENST00000360356 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
PARP9-201ENST00000360356 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
PARP9-201ENST00000360356 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
PARP9-201ENST00000360356 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.35
PARP9-201ENST00000360356 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
PARP9-201ENST00000360356 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.36
PARP9-201ENST00000360356 SOGA1O94964 1423 aa12.83□□□□□ -0.36
PARP9-201ENST00000360356 CCDC136Q96JN2 1154 aa12.81□□□□□ -0.36
PARP9-201ENST00000360356 BCANQ96GW7 911 aa12.81□□□□□ -0.36
PARP9-201ENST00000360356 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
PARP9-201ENST00000360356 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
PARP9-201ENST00000360356 MSH5O43196 834 aa12.79□□□□□ -0.36
PARP9-201ENST00000360356 UBE2Q2Q8WVN8 375 aa12.78□□□□□ -0.36
PARP9-201ENST00000360356 CUX2O14529 1486 aa12.78□□□□□ -0.36
PARP9-201ENST00000360356 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
PARP9-201ENST00000360356 DEKP35659 375 aaKnown RBP12.75□□□□□ -0.37
PARP9-201ENST00000360356 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
PARP9-201ENST00000360356 CLIP1P30622 1438 aa12.74□□□□□ -0.37
PARP9-201ENST00000360356 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
PARP9-201ENST00000360356 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.38
PARP9-201ENST00000360356 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
PARP9-201ENST00000360356 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
PARP9-201ENST00000360356 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
PARP9-201ENST00000360356 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
PARP9-201ENST00000360356 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.39
PARP9-201ENST00000360356 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
PARP9-201ENST00000360356 FKBP8Q14318 412 aa12.63□□□□□ -0.39
PARP9-201ENST00000360356 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
PARP9-201ENST00000360356 DHX57Q6P158 1386 aaKnown RBP12.61□□□□□ -0.39
PARP9-201ENST00000360356 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
PARP9-201ENST00000360356 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
PARP9-201ENST00000360356 ITGAEP38570 1179 aa12.59□□□□□ -0.39
PARP9-201ENST00000360356 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
PARP9-201ENST00000360356 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
PARP9-201ENST00000360356 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
PARP9-201ENST00000360356 FANCIQ9NVI1 1328 aa12.56□□□□□ -0.4
PARP9-201ENST00000360356 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms