RNA–Protein interactions for RNA: ENST00000617391.4

ZNF343-208, Transcript of zinc finger protein 343, humanhuman

TSL 4 BASIC

Gene ZNF343, Length 3,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF343-208ENST00000617391 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.43
ZNF343-208ENST00000617391 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
ZNF343-208ENST00000617391 ABCC9O60706 1549 aa14.93□□□□□ -0.02
ZNF343-208ENST00000617391 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
ZNF343-208ENST00000617391 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
ZNF343-208ENST00000617391 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
ZNF343-208ENST00000617391 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
ZNF343-208ENST00000617391 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
ZNF343-208ENST00000617391 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
ZNF343-208ENST00000617391 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
ZNF343-208ENST00000617391 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
ZNF343-208ENST00000617391 NACADO15069 1562 aa14.49□□□□□ -0.09
ZNF343-208ENST00000617391 HRCP23327 699 aa14.44□□□□□ -0.1
ZNF343-208ENST00000617391 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
ZNF343-208ENST00000617391 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
ZNF343-208ENST00000617391 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
ZNF343-208ENST00000617391 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
ZNF343-208ENST00000617391 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
ZNF343-208ENST00000617391 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
ZNF343-208ENST00000617391 UNC13AQ9UPW8 1703 aa14.06□□□□□ -0.16
ZNF343-208ENST00000617391 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
ZNF343-208ENST00000617391 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
ZNF343-208ENST00000617391 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
ZNF343-208ENST00000617391 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
ZNF343-208ENST00000617391 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.21
ZNF343-208ENST00000617391 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
ZNF343-208ENST00000617391 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
ZNF343-208ENST00000617391 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
ZNF343-208ENST00000617391 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
ZNF343-208ENST00000617391 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.23
ZNF343-208ENST00000617391 WIZO95785 1651 aa13.61□□□□□ -0.23
ZNF343-208ENST00000617391 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
ZNF343-208ENST00000617391 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
ZNF343-208ENST00000617391 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
ZNF343-208ENST00000617391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.24
ZNF343-208ENST00000617391 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
ZNF343-208ENST00000617391 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
ZNF343-208ENST00000617391 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
ZNF343-208ENST00000617391 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
ZNF343-208ENST00000617391 NEUROD1Q13562 356 aa13.46□□□□□ -0.26
ZNF343-208ENST00000617391 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
ZNF343-208ENST00000617391 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
ZNF343-208ENST00000617391 TOP2AP11388 1531 aaKnown RBP13.45□□□□□ -0.26
ZNF343-208ENST00000617391 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
ZNF343-208ENST00000617391 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
ZNF343-208ENST00000617391 YTHDC1Q96MU7 727 aaKnown RBP13.42□□□□□ -0.26
ZNF343-208ENST00000617391 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
ZNF343-208ENST00000617391 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
ZNF343-208ENST00000617391 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
ZNF343-208ENST00000617391 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
ZNF343-208ENST00000617391 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
ZNF343-208ENST00000617391 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
ZNF343-208ENST00000617391 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
ZNF343-208ENST00000617391 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
ZNF343-208ENST00000617391 CFTRP13569 1480 aa13.08□□□□□ -0.32
ZNF343-208ENST00000617391 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
ZNF343-208ENST00000617391 NESP48681 1621 aa13.05□□□□□ -0.32
ZNF343-208ENST00000617391 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
ZNF343-208ENST00000617391 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
ZNF343-208ENST00000617391 MIER1Q8N108 512 aa13□□□□□ -0.33
ZNF343-208ENST00000617391 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
ZNF343-208ENST00000617391 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
ZNF343-208ENST00000617391 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
ZNF343-208ENST00000617391 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
ZNF343-208ENST00000617391 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
ZNF343-208ENST00000617391 MYT1Q01538 1121 aa12.93□□□□□ -0.34
ZNF343-208ENST00000617391 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
ZNF343-208ENST00000617391 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
ZNF343-208ENST00000617391 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
ZNF343-208ENST00000617391 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
ZNF343-208ENST00000617391 CUX1P39880 1505 aa12.86□□□□□ -0.35
ZNF343-208ENST00000617391 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
ZNF343-208ENST00000617391 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
ZNF343-208ENST00000617391 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
ZNF343-208ENST00000617391 BCANQ96GW7 911 aa12.8□□□□□ -0.36
ZNF343-208ENST00000617391 SOGA1O94964 1423 aa12.79□□□□□ -0.36
ZNF343-208ENST00000617391 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
ZNF343-208ENST00000617391 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
ZNF343-208ENST00000617391 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
ZNF343-208ENST00000617391 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
ZNF343-208ENST00000617391 DNMBPQ6XZF7 1577 aa12.76□□□□□ -0.37
ZNF343-208ENST00000617391 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
ZNF343-208ENST00000617391 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
ZNF343-208ENST00000617391 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
ZNF343-208ENST00000617391 APLP2Q06481 763 aa12.71□□□□□ -0.37
ZNF343-208ENST00000617391 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.38
ZNF343-208ENST00000617391 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
ZNF343-208ENST00000617391 ITGAEP38570 1179 aa12.69□□□□□ -0.38
ZNF343-208ENST00000617391 CUX2O14529 1486 aa12.67□□□□□ -0.38
ZNF343-208ENST00000617391 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
ZNF343-208ENST00000617391 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
ZNF343-208ENST00000617391 EEA1Q15075 1411 aa12.65□□□□□ -0.38
ZNF343-208ENST00000617391 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
ZNF343-208ENST00000617391 WDR62O43379 1518 aa12.64□□□□□ -0.39
ZNF343-208ENST00000617391 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
ZNF343-208ENST00000617391 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
ZNF343-208ENST00000617391 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
ZNF343-208ENST00000617391 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
ZNF343-208ENST00000617391 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
ZNF343-208ENST00000617391 IGF1RP08069 1367 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms