RNA–Protein interactions for RNA: ENST00000341464.9

ZKSCAN3-202, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

TSL 2 BASIC

Gene ZKSCAN3, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-202ENST00000341464 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
ZKSCAN3-202ENST00000341464 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
ZKSCAN3-202ENST00000341464 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
ZKSCAN3-202ENST00000341464 ABCC9O60706 1549 aa15.38■□□□□ 0.05
ZKSCAN3-202ENST00000341464 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
ZKSCAN3-202ENST00000341464 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
ZKSCAN3-202ENST00000341464 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
ZKSCAN3-202ENST00000341464 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
ZKSCAN3-202ENST00000341464 NACADO15069 1562 aa15.04■□□□□ -0
ZKSCAN3-202ENST00000341464 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
ZKSCAN3-202ENST00000341464 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
ZKSCAN3-202ENST00000341464 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
ZKSCAN3-202ENST00000341464 SUPT5HO00267 1087 aaKnown RBP14.75□□□□□ -0.05
ZKSCAN3-202ENST00000341464 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
ZKSCAN3-202ENST00000341464 HRCP23327 699 aa14.73□□□□□ -0.05
ZKSCAN3-202ENST00000341464 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
ZKSCAN3-202ENST00000341464 MYT1Q01538 1121 aa14.4□□□□□ -0.1
ZKSCAN3-202ENST00000341464 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
ZKSCAN3-202ENST00000341464 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
ZKSCAN3-202ENST00000341464 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
ZKSCAN3-202ENST00000341464 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
ZKSCAN3-202ENST00000341464 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
ZKSCAN3-202ENST00000341464 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
ZKSCAN3-202ENST00000341464 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
ZKSCAN3-202ENST00000341464 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
ZKSCAN3-202ENST00000341464 WIZO95785 1651 aa14.14□□□□□ -0.15
ZKSCAN3-202ENST00000341464 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
ZKSCAN3-202ENST00000341464 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
ZKSCAN3-202ENST00000341464 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
ZKSCAN3-202ENST00000341464 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
ZKSCAN3-202ENST00000341464 ZEB1P37275 1124 aaPredicted RBP14.02□□□□□ -0.16
ZKSCAN3-202ENST00000341464 PEG3Q9GZU2 1588 aa13.98□□□□□ -0.17
ZKSCAN3-202ENST00000341464 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
ZKSCAN3-202ENST00000341464 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
ZKSCAN3-202ENST00000341464 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
ZKSCAN3-202ENST00000341464 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
ZKSCAN3-202ENST00000341464 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
ZKSCAN3-202ENST00000341464 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
ZKSCAN3-202ENST00000341464 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
ZKSCAN3-202ENST00000341464 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
ZKSCAN3-202ENST00000341464 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
ZKSCAN3-202ENST00000341464 NCAPD3P42695 1498 aa13.83□□□□□ -0.19
ZKSCAN3-202ENST00000341464 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
ZKSCAN3-202ENST00000341464 LOC105371045A0A1W2PR82 267 aa13.64□□□□□ -0.23
ZKSCAN3-202ENST00000341464 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
ZKSCAN3-202ENST00000341464 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
ZKSCAN3-202ENST00000341464 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
ZKSCAN3-202ENST00000341464 FAM9AQ8IZU1 332 aaPredicted RBP13.6□□□□□ -0.23
ZKSCAN3-202ENST00000341464 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
ZKSCAN3-202ENST00000341464 CENPBP07199 599 aaPredicted RBP13.54□□□□□ -0.24
ZKSCAN3-202ENST00000341464 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
ZKSCAN3-202ENST00000341464 EEA1Q15075 1411 aa13.49□□□□□ -0.25
ZKSCAN3-202ENST00000341464 CFTRP13569 1480 aa13.49□□□□□ -0.25
ZKSCAN3-202ENST00000341464 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
ZKSCAN3-202ENST00000341464 SYNJ1O43426 1573 aa13.46□□□□□ -0.26
ZKSCAN3-202ENST00000341464 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
ZKSCAN3-202ENST00000341464 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
ZKSCAN3-202ENST00000341464 SOGA1O94964 1423 aa13.43□□□□□ -0.26
ZKSCAN3-202ENST00000341464 NESP48681 1621 aa13.43□□□□□ -0.26
ZKSCAN3-202ENST00000341464 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
ZKSCAN3-202ENST00000341464 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
ZKSCAN3-202ENST00000341464 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
ZKSCAN3-202ENST00000341464 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
ZKSCAN3-202ENST00000341464 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
ZKSCAN3-202ENST00000341464 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
ZKSCAN3-202ENST00000341464 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
ZKSCAN3-202ENST00000341464 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
ZKSCAN3-202ENST00000341464 CUX1P39880 1505 aa13.32□□□□□ -0.28
ZKSCAN3-202ENST00000341464 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
ZKSCAN3-202ENST00000341464 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
ZKSCAN3-202ENST00000341464 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
ZKSCAN3-202ENST00000341464 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
ZKSCAN3-202ENST00000341464 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
ZKSCAN3-202ENST00000341464 DIEXFQ68CQ4 756 aaKnown RBP13.26□□□□□ -0.29
ZKSCAN3-202ENST00000341464 KIF21BO75037 1637 aa13.26□□□□□ -0.29
ZKSCAN3-202ENST00000341464 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
ZKSCAN3-202ENST00000341464 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
ZKSCAN3-202ENST00000341464 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
ZKSCAN3-202ENST00000341464 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
ZKSCAN3-202ENST00000341464 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
ZKSCAN3-202ENST00000341464 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
ZKSCAN3-202ENST00000341464 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
ZKSCAN3-202ENST00000341464 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
ZKSCAN3-202ENST00000341464 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
ZKSCAN3-202ENST00000341464 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
ZKSCAN3-202ENST00000341464 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
ZKSCAN3-202ENST00000341464 RAPGEF2Q9Y4G8 1499 aa13.15□□□□□ -0.3
ZKSCAN3-202ENST00000341464 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
ZKSCAN3-202ENST00000341464 WDR62O43379 1518 aa13.13□□□□□ -0.31
ZKSCAN3-202ENST00000341464 CUX2O14529 1486 aa13.13□□□□□ -0.31
ZKSCAN3-202ENST00000341464 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
ZKSCAN3-202ENST00000341464 CLIP1P30622 1438 aa13.09□□□□□ -0.31
ZKSCAN3-202ENST00000341464 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
ZKSCAN3-202ENST00000341464 IGF1RP08069 1367 aa13.06□□□□□ -0.32
ZKSCAN3-202ENST00000341464 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
ZKSCAN3-202ENST00000341464 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
ZKSCAN3-202ENST00000341464 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
ZKSCAN3-202ENST00000341464 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
ZKSCAN3-202ENST00000341464 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.32
ZKSCAN3-202ENST00000341464 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms