RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
TREM1-202ENST00000334475 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
TREM1-202ENST00000334475 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
TREM1-202ENST00000334475 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
TREM1-202ENST00000334475 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
TREM1-202ENST00000334475 ABCC9O60706 1549 aa17.77■□□□□ 0.43
TREM1-202ENST00000334475 FOXD1Q16676 465 aa17.39■□□□□ 0.37
TREM1-202ENST00000334475 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
TREM1-202ENST00000334475 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
TREM1-202ENST00000334475 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
TREM1-202ENST00000334475 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
TREM1-202ENST00000334475 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
TREM1-202ENST00000334475 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
TREM1-202ENST00000334475 NACADO15069 1562 aa16.47■□□□□ 0.23
TREM1-202ENST00000334475 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
TREM1-202ENST00000334475 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
TREM1-202ENST00000334475 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
TREM1-202ENST00000334475 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
TREM1-202ENST00000334475 ADRA2BP18089 450 aa16.37■□□□□ 0.21
TREM1-202ENST00000334475 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
TREM1-202ENST00000334475 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
TREM1-202ENST00000334475 MSH5O43196 834 aa16.25■□□□□ 0.19
TREM1-202ENST00000334475 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
TREM1-202ENST00000334475 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
TREM1-202ENST00000334475 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
TREM1-202ENST00000334475 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
TREM1-202ENST00000334475 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
TREM1-202ENST00000334475 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
TREM1-202ENST00000334475 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
TREM1-202ENST00000334475 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
TREM1-202ENST00000334475 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
TREM1-202ENST00000334475 CUX2O14529 1486 aa15.29■□□□□ 0.04
TREM1-202ENST00000334475 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
TREM1-202ENST00000334475 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
TREM1-202ENST00000334475 NESP48681 1621 aa15.25■□□□□ 0.03
TREM1-202ENST00000334475 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
TREM1-202ENST00000334475 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
TREM1-202ENST00000334475 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
TREM1-202ENST00000334475 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
TREM1-202ENST00000334475 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
TREM1-202ENST00000334475 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
TREM1-202ENST00000334475 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
TREM1-202ENST00000334475 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
TREM1-202ENST00000334475 SMARCA2P51531 1590 aa15.05■□□□□ -0
TREM1-202ENST00000334475 WIZO95785 1651 aa15.01□□□□□ -0.01
TREM1-202ENST00000334475 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
TREM1-202ENST00000334475 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
TREM1-202ENST00000334475 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
TREM1-202ENST00000334475 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
TREM1-202ENST00000334475 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
TREM1-202ENST00000334475 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
TREM1-202ENST00000334475 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
TREM1-202ENST00000334475 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
TREM1-202ENST00000334475 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
TREM1-202ENST00000334475 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
TREM1-202ENST00000334475 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
TREM1-202ENST00000334475 WDR62O43379 1518 aa14.76□□□□□ -0.05
TREM1-202ENST00000334475 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
TREM1-202ENST00000334475 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
TREM1-202ENST00000334475 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
TREM1-202ENST00000334475 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
TREM1-202ENST00000334475 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
TREM1-202ENST00000334475 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
TREM1-202ENST00000334475 CFTRP13569 1480 aa14.57□□□□□ -0.08
TREM1-202ENST00000334475 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
TREM1-202ENST00000334475 RIMBP3CA6NJZ7 1639 aa14.5□□□□□ -0.09
TREM1-202ENST00000334475 RIMBP3BA6NNM3 1639 aa14.5□□□□□ -0.09
TREM1-202ENST00000334475 RIMBP3Q9UFD9 1639 aa14.5□□□□□ -0.09
TREM1-202ENST00000334475 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
TREM1-202ENST00000334475 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
TREM1-202ENST00000334475 LOC105371045A0A1W2PR82 267 aa14.45□□□□□ -0.1
TREM1-202ENST00000334475 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
TREM1-202ENST00000334475 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
TREM1-202ENST00000334475 EEA1Q15075 1411 aa14.43□□□□□ -0.1
TREM1-202ENST00000334475 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
TREM1-202ENST00000334475 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
TREM1-202ENST00000334475 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
TREM1-202ENST00000334475 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
TREM1-202ENST00000334475 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
TREM1-202ENST00000334475 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
TREM1-202ENST00000334475 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
TREM1-202ENST00000334475 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
TREM1-202ENST00000334475 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
TREM1-202ENST00000334475 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
TREM1-202ENST00000334475 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
TREM1-202ENST00000334475 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.12
TREM1-202ENST00000334475 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
TREM1-202ENST00000334475 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
TREM1-202ENST00000334475 CHD1O14646 1710 aa14.28□□□□□ -0.12
TREM1-202ENST00000334475 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
TREM1-202ENST00000334475 KIF21BO75037 1637 aa14.23□□□□□ -0.13
TREM1-202ENST00000334475 SOGA1O94964 1423 aa14.23□□□□□ -0.13
TREM1-202ENST00000334475 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
TREM1-202ENST00000334475 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
TREM1-202ENST00000334475 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
TREM1-202ENST00000334475 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
TREM1-202ENST00000334475 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
TREM1-202ENST00000334475 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
TREM1-202ENST00000334475 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
TREM1-202ENST00000334475 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms