RNA–Protein interactions for RNA: ENST00000556434.5

LINC01588-211, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 5 BASIC

Gene LINC01588, Length 892 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-211ENST00000556434 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
LINC01588-211ENST00000556434 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
LINC01588-211ENST00000556434 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
LINC01588-211ENST00000556434 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
LINC01588-211ENST00000556434 ABCC9O60706 1549 aa16.77■□□□□ 0.28
LINC01588-211ENST00000556434 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
LINC01588-211ENST00000556434 DCAF1Q9Y4B6 1507 aa16.42■□□□□ 0.22
LINC01588-211ENST00000556434 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
LINC01588-211ENST00000556434 NACADO15069 1562 aa16.33■□□□□ 0.2
LINC01588-211ENST00000556434 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
LINC01588-211ENST00000556434 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
LINC01588-211ENST00000556434 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
LINC01588-211ENST00000556434 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
LINC01588-211ENST00000556434 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
LINC01588-211ENST00000556434 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01588-211ENST00000556434 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
LINC01588-211ENST00000556434 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
LINC01588-211ENST00000556434 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.05
LINC01588-211ENST00000556434 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
LINC01588-211ENST00000556434 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
LINC01588-211ENST00000556434 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
LINC01588-211ENST00000556434 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
LINC01588-211ENST00000556434 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
LINC01588-211ENST00000556434 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
LINC01588-211ENST00000556434 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
LINC01588-211ENST00000556434 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
LINC01588-211ENST00000556434 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
LINC01588-211ENST00000556434 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
LINC01588-211ENST00000556434 SMARCA2P51531 1590 aa15.08■□□□□ 0
LINC01588-211ENST00000556434 WIZO95785 1651 aa15.05■□□□□ -0
LINC01588-211ENST00000556434 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
LINC01588-211ENST00000556434 HMGXB3Q12766 1538 aa15.03■□□□□ -0
LINC01588-211ENST00000556434 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
LINC01588-211ENST00000556434 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
LINC01588-211ENST00000556434 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
LINC01588-211ENST00000556434 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
LINC01588-211ENST00000556434 CFTRP13569 1480 aa14.66□□□□□ -0.06
LINC01588-211ENST00000556434 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
LINC01588-211ENST00000556434 NESP48681 1621 aa14.64□□□□□ -0.07
LINC01588-211ENST00000556434 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
LINC01588-211ENST00000556434 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
LINC01588-211ENST00000556434 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
LINC01588-211ENST00000556434 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
LINC01588-211ENST00000556434 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
LINC01588-211ENST00000556434 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
LINC01588-211ENST00000556434 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
LINC01588-211ENST00000556434 THOC2Q8NI27 1593 aaKnown RBP14.35□□□□□ -0.11
LINC01588-211ENST00000556434 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
LINC01588-211ENST00000556434 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
LINC01588-211ENST00000556434 WDR62O43379 1518 aa14.31□□□□□ -0.12
LINC01588-211ENST00000556434 CUX1P39880 1505 aa14.3□□□□□ -0.12
LINC01588-211ENST00000556434 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
LINC01588-211ENST00000556434 ABCC8Q09428 1581 aa14.27□□□□□ -0.12
LINC01588-211ENST00000556434 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
LINC01588-211ENST00000556434 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
LINC01588-211ENST00000556434 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
LINC01588-211ENST00000556434 CUX2O14529 1486 aa14.21□□□□□ -0.13
LINC01588-211ENST00000556434 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
LINC01588-211ENST00000556434 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
LINC01588-211ENST00000556434 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
LINC01588-211ENST00000556434 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
LINC01588-211ENST00000556434 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
LINC01588-211ENST00000556434 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
LINC01588-211ENST00000556434 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
LINC01588-211ENST00000556434 FOXD1Q16676 465 aa14.11□□□□□ -0.15
LINC01588-211ENST00000556434 SOGA1O94964 1423 aa14.1□□□□□ -0.15
LINC01588-211ENST00000556434 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
LINC01588-211ENST00000556434 ABCA10Q8WWZ4 1543 aa14.08□□□□□ -0.16
LINC01588-211ENST00000556434 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
LINC01588-211ENST00000556434 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
LINC01588-211ENST00000556434 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
LINC01588-211ENST00000556434 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
LINC01588-211ENST00000556434 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC01588-211ENST00000556434 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
LINC01588-211ENST00000556434 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LINC01588-211ENST00000556434 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
LINC01588-211ENST00000556434 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
LINC01588-211ENST00000556434 IGF1RP08069 1367 aa13.92□□□□□ -0.18
LINC01588-211ENST00000556434 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
LINC01588-211ENST00000556434 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
LINC01588-211ENST00000556434 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
LINC01588-211ENST00000556434 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
LINC01588-211ENST00000556434 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
LINC01588-211ENST00000556434 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
LINC01588-211ENST00000556434 EEA1Q15075 1411 aa13.83□□□□□ -0.2
LINC01588-211ENST00000556434 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
LINC01588-211ENST00000556434 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
LINC01588-211ENST00000556434 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
LINC01588-211ENST00000556434 FHAD1B1AJZ9 1412 aa13.8□□□□□ -0.2
LINC01588-211ENST00000556434 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
LINC01588-211ENST00000556434 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
LINC01588-211ENST00000556434 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
LINC01588-211ENST00000556434 CUL7Q14999 1698 aa13.75□□□□□ -0.21
LINC01588-211ENST00000556434 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
LINC01588-211ENST00000556434 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
LINC01588-211ENST00000556434 NUP160Q12769 1436 aa13.72□□□□□ -0.21
LINC01588-211ENST00000556434 RAPGEF2Q9Y4G8 1499 aa13.71□□□□□ -0.21
LINC01588-211ENST00000556434 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
LINC01588-211ENST00000556434 KIF21BO75037 1637 aa13.68□□□□□ -0.22
LINC01588-211ENST00000556434 CHD1O14646 1710 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms