RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
YIPF4-201ENST00000238831 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
YIPF4-201ENST00000238831 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
YIPF4-201ENST00000238831 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
YIPF4-201ENST00000238831 APLP2Q06481 763 aa13.67□□□□□ -0.22
YIPF4-201ENST00000238831 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
YIPF4-201ENST00000238831 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
YIPF4-201ENST00000238831 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
YIPF4-201ENST00000238831 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
YIPF4-201ENST00000238831 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
YIPF4-201ENST00000238831 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
YIPF4-201ENST00000238831 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
YIPF4-201ENST00000238831 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
YIPF4-201ENST00000238831 MYT1Q01538 1121 aa13.12□□□□□ -0.31
YIPF4-201ENST00000238831 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
YIPF4-201ENST00000238831 NEFLP07196 543 aa13.08□□□□□ -0.31
YIPF4-201ENST00000238831 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
YIPF4-201ENST00000238831 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
YIPF4-201ENST00000238831 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
YIPF4-201ENST00000238831 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
YIPF4-201ENST00000238831 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
YIPF4-201ENST00000238831 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
YIPF4-201ENST00000238831 CNGB1Q14028 1251 aaPredicted RBP12.85□□□□□ -0.35
YIPF4-201ENST00000238831 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
YIPF4-201ENST00000238831 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
YIPF4-201ENST00000238831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
YIPF4-201ENST00000238831 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
YIPF4-201ENST00000238831 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
YIPF4-201ENST00000238831 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
YIPF4-201ENST00000238831 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
YIPF4-201ENST00000238831 ITGAEP38570 1179 aa12.71□□□□□ -0.38
YIPF4-201ENST00000238831 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
YIPF4-201ENST00000238831 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
YIPF4-201ENST00000238831 SLC24A1O60721 1099 aa12.52□□□□□ -0.4
YIPF4-201ENST00000238831 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
YIPF4-201ENST00000238831 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
YIPF4-201ENST00000238831 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
YIPF4-201ENST00000238831 BCANQ96GW7 911 aa12.34□□□□□ -0.43
YIPF4-201ENST00000238831 TRIM52Q96A61 297 aa12.27□□□□□ -0.44
YIPF4-201ENST00000238831 FAM50AQ14320 339 aaKnown RBP12.26□□□□□ -0.45
YIPF4-201ENST00000238831 TRIM26Q12899 539 aaPredicted RBP12.26□□□□□ -0.45
YIPF4-201ENST00000238831 ZNF326Q5BKZ1 582 aaKnown RBP12.24□□□□□ -0.45
YIPF4-201ENST00000238831 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
YIPF4-201ENST00000238831 HRCP23327 699 aa12.2□□□□□ -0.46
YIPF4-201ENST00000238831 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
YIPF4-201ENST00000238831 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
YIPF4-201ENST00000238831 NEFMP07197 916 aa12.16□□□□□ -0.46
YIPF4-201ENST00000238831 FBLN2P98095 1184 aa12.12□□□□□ -0.47
YIPF4-201ENST00000238831 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
YIPF4-201ENST00000238831 CDK11AQ9UQ88 783 aaPredicted RBP12.06□□□□□ -0.48
YIPF4-201ENST00000238831 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
YIPF4-201ENST00000238831 ANP32CO43423 234 aa12.02□□□□□ -0.48
YIPF4-201ENST00000238831 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
YIPF4-201ENST00000238831 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
YIPF4-201ENST00000238831 A0A0G2JS52 829 aa11.99□□□□□ -0.49
YIPF4-201ENST00000238831 HSP90AA1P07900 732 aaKnown RBP11.99□□□□□ -0.49
YIPF4-201ENST00000238831 ARID3CA6NKF2 412 aa11.97□□□□□ -0.49
YIPF4-201ENST00000238831 ANP32BQ92688 251 aaKnown RBP11.97□□□□□ -0.49
YIPF4-201ENST00000238831 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.5
YIPF4-201ENST00000238831 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
YIPF4-201ENST00000238831 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
YIPF4-201ENST00000238831 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
YIPF4-201ENST00000238831 ANP32AP39687 249 aaKnown RBP11.91□□□□□ -0.5
YIPF4-201ENST00000238831 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
YIPF4-201ENST00000238831 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
YIPF4-201ENST00000238831 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
YIPF4-201ENST00000238831 ARXQ96QS3 562 aa11.84□□□□□ -0.51
YIPF4-201ENST00000238831 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
YIPF4-201ENST00000238831 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
YIPF4-201ENST00000238831 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
YIPF4-201ENST00000238831 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
YIPF4-201ENST00000238831 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
YIPF4-201ENST00000238831 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
YIPF4-201ENST00000238831 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
YIPF4-201ENST00000238831 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
YIPF4-201ENST00000238831 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
YIPF4-201ENST00000238831 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
YIPF4-201ENST00000238831 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
YIPF4-201ENST00000238831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.549e-7■■■■□ 22.1
YIPF4-201ENST00000238831 GLIPR1L2Q4G1C9 344 aa11.67□□□□□ -0.54
YIPF4-201ENST00000238831 NBR1Q14596 966 aa11.66□□□□□ -0.54
YIPF4-201ENST00000238831 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
YIPF4-201ENST00000238831 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
YIPF4-201ENST00000238831 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
YIPF4-201ENST00000238831 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.63□□□□□ -0.55
YIPF4-201ENST00000238831 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
YIPF4-201ENST00000238831 FKBP8Q14318 412 aa11.62□□□□□ -0.55
YIPF4-201ENST00000238831 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
YIPF4-201ENST00000238831 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
YIPF4-201ENST00000238831 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
YIPF4-201ENST00000238831 ABCC9O60706 1549 aa11.59□□□□□ -0.55
YIPF4-201ENST00000238831 NPHP1O15259 732 aa11.58□□□□□ -0.56
YIPF4-201ENST00000238831 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
YIPF4-201ENST00000238831 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
YIPF4-201ENST00000238831 TONSLQ96HA7 1378 aa11.55□□□□□ -0.56
YIPF4-201ENST00000238831 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
YIPF4-201ENST00000238831 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
YIPF4-201ENST00000238831 ZRSR1Q15695 479 aaKnown RBP11.54□□□□□ -0.56
YIPF4-201ENST00000238831 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.56
YIPF4-201ENST00000238831 CLSTN1O94985 981 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms