RNA–Protein interactions for RNA: ENST00000272732.10

SCRN3-201, Transcript of secernin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN3, Length 3,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-201ENST00000272732 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
SCRN3-201ENST00000272732 SLC24A1O60721 1099 aa17.35■□□□□ 0.37
SCRN3-201ENST00000272732 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
SCRN3-201ENST00000272732 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
SCRN3-201ENST00000272732 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
SCRN3-201ENST00000272732 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
SCRN3-201ENST00000272732 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
SCRN3-201ENST00000272732 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
SCRN3-201ENST00000272732 NISCHQ9Y2I1 1504 aa15.75■□□□□ 0.11
SCRN3-201ENST00000272732 KCNA4P22459 653 aa15.74■□□□□ 0.11
SCRN3-201ENST00000272732 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
SCRN3-201ENST00000272732 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
SCRN3-201ENST00000272732 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
SCRN3-201ENST00000272732 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
SCRN3-201ENST00000272732 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
SCRN3-201ENST00000272732 ADRA2BP18089 450 aa14.84□□□□□ -0.03
SCRN3-201ENST00000272732 TIMELESSQ9UNS1 1208 aa14.76□□□□□ -0.05
SCRN3-201ENST00000272732 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
SCRN3-201ENST00000272732 ZBTB22O15209 634 aa14.64□□□□□ -0.07
SCRN3-201ENST00000272732 ARXQ96QS3 562 aa14.61□□□□□ -0.07
SCRN3-201ENST00000272732 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
SCRN3-201ENST00000272732 BCANQ96GW7 911 aa14.5□□□□□ -0.09
SCRN3-201ENST00000272732 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
SCRN3-201ENST00000272732 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
SCRN3-201ENST00000272732 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
SCRN3-201ENST00000272732 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
SCRN3-201ENST00000272732 FKBP8Q14318 412 aa14.14□□□□□ -0.15
SCRN3-201ENST00000272732 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
SCRN3-201ENST00000272732 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
SCRN3-201ENST00000272732 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
SCRN3-201ENST00000272732 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
SCRN3-201ENST00000272732 APLP2Q06481 763 aa14.04□□□□□ -0.16
SCRN3-201ENST00000272732 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
SCRN3-201ENST00000272732 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
SCRN3-201ENST00000272732 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
SCRN3-201ENST00000272732 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
SCRN3-201ENST00000272732 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
SCRN3-201ENST00000272732 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
SCRN3-201ENST00000272732 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
SCRN3-201ENST00000272732 FBLN2P98095 1184 aa13.79□□□□□ -0.2
SCRN3-201ENST00000272732 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
SCRN3-201ENST00000272732 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
SCRN3-201ENST00000272732 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
SCRN3-201ENST00000272732 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
SCRN3-201ENST00000272732 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
SCRN3-201ENST00000272732 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
SCRN3-201ENST00000272732 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
SCRN3-201ENST00000272732 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
SCRN3-201ENST00000272732 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
SCRN3-201ENST00000272732 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
SCRN3-201ENST00000272732 MYT1Q01538 1121 aa13.43□□□□□ -0.26
SCRN3-201ENST00000272732 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
SCRN3-201ENST00000272732 HRCP23327 699 aa13.31□□□□□ -0.28
SCRN3-201ENST00000272732 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
SCRN3-201ENST00000272732 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
SCRN3-201ENST00000272732 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
SCRN3-201ENST00000272732 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
SCRN3-201ENST00000272732 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
SCRN3-201ENST00000272732 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
SCRN3-201ENST00000272732 NBR1Q14596 966 aa13.2□□□□□ -0.3
SCRN3-201ENST00000272732 PKD2Q13563 968 aa13.15□□□□□ -0.3
SCRN3-201ENST00000272732 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCRN3-201ENST00000272732 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
SCRN3-201ENST00000272732 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
SCRN3-201ENST00000272732 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
SCRN3-201ENST00000272732 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
SCRN3-201ENST00000272732 FOXD1Q16676 465 aa13.02□□□□□ -0.33
SCRN3-201ENST00000272732 ABCC9O60706 1549 aa13.02□□□□□ -0.33
SCRN3-201ENST00000272732 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
SCRN3-201ENST00000272732 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
SCRN3-201ENST00000272732 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
SCRN3-201ENST00000272732 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
SCRN3-201ENST00000272732 NACADO15069 1562 aa12.9□□□□□ -0.34
SCRN3-201ENST00000272732 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
SCRN3-201ENST00000272732 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
SCRN3-201ENST00000272732 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.35
SCRN3-201ENST00000272732 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
SCRN3-201ENST00000272732 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
SCRN3-201ENST00000272732 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
SCRN3-201ENST00000272732 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
SCRN3-201ENST00000272732 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
SCRN3-201ENST00000272732 ARID3AQ99856 593 aa12.79□□□□□ -0.36
SCRN3-201ENST00000272732 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
SCRN3-201ENST00000272732 IGSF3O75054 1194 aa12.72□□□□□ -0.37
SCRN3-201ENST00000272732 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
SCRN3-201ENST00000272732 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
SCRN3-201ENST00000272732 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
SCRN3-201ENST00000272732 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
SCRN3-201ENST00000272732 RGL2O15211 777 aa12.62□□□□□ -0.39
SCRN3-201ENST00000272732 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
SCRN3-201ENST00000272732 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
SCRN3-201ENST00000272732 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
SCRN3-201ENST00000272732 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
SCRN3-201ENST00000272732 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-201ENST00000272732 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
SCRN3-201ENST00000272732 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
SCRN3-201ENST00000272732 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
SCRN3-201ENST00000272732 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
SCRN3-201ENST00000272732 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
SCRN3-201ENST00000272732 ZMYND15Q9H091 742 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms