RNA–Protein interactions for RNA: ENST00000611462.1

TRBV10-3-201, Transcript of T cell receptor beta variable 10-3, humanhuman

APPRIS P1 BASIC

Gene TRBV10-3, Length 368 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-3-201ENST00000611462 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
TRBV10-3-201ENST00000611462 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
TRBV10-3-201ENST00000611462 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
TRBV10-3-201ENST00000611462 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
TRBV10-3-201ENST00000611462 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
TRBV10-3-201ENST00000611462 ABCC9O60706 1549 aa16■□□□□ 0.15
TRBV10-3-201ENST00000611462 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
TRBV10-3-201ENST00000611462 NACADO15069 1562 aa15.77■□□□□ 0.11
TRBV10-3-201ENST00000611462 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
TRBV10-3-201ENST00000611462 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
TRBV10-3-201ENST00000611462 SCRIBQ14160 1630 aa15.46■□□□□ 0.06
TRBV10-3-201ENST00000611462 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
TRBV10-3-201ENST00000611462 UNC13AQ9UPW8 1703 aa15.16■□□□□ 0.02
TRBV10-3-201ENST00000611462 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRBV10-3-201ENST00000611462 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
TRBV10-3-201ENST00000611462 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
TRBV10-3-201ENST00000611462 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
TRBV10-3-201ENST00000611462 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
TRBV10-3-201ENST00000611462 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
TRBV10-3-201ENST00000611462 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
TRBV10-3-201ENST00000611462 WIZO95785 1651 aa14.75□□□□□ -0.05
TRBV10-3-201ENST00000611462 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
TRBV10-3-201ENST00000611462 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
TRBV10-3-201ENST00000611462 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
TRBV10-3-201ENST00000611462 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
TRBV10-3-201ENST00000611462 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
TRBV10-3-201ENST00000611462 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
TRBV10-3-201ENST00000611462 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
TRBV10-3-201ENST00000611462 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
TRBV10-3-201ENST00000611462 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
TRBV10-3-201ENST00000611462 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
TRBV10-3-201ENST00000611462 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
TRBV10-3-201ENST00000611462 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
TRBV10-3-201ENST00000611462 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
TRBV10-3-201ENST00000611462 CFTRP13569 1480 aa14.21□□□□□ -0.13
TRBV10-3-201ENST00000611462 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
TRBV10-3-201ENST00000611462 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
TRBV10-3-201ENST00000611462 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
TRBV10-3-201ENST00000611462 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
TRBV10-3-201ENST00000611462 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
TRBV10-3-201ENST00000611462 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
TRBV10-3-201ENST00000611462 NESP48681 1621 aa14.01□□□□□ -0.17
TRBV10-3-201ENST00000611462 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
TRBV10-3-201ENST00000611462 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
TRBV10-3-201ENST00000611462 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
TRBV10-3-201ENST00000611462 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
TRBV10-3-201ENST00000611462 EEA1Q15075 1411 aa13.95□□□□□ -0.18
TRBV10-3-201ENST00000611462 CUX1P39880 1505 aa13.95□□□□□ -0.18
TRBV10-3-201ENST00000611462 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
TRBV10-3-201ENST00000611462 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
TRBV10-3-201ENST00000611462 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
TRBV10-3-201ENST00000611462 SOGA1O94964 1423 aa13.91□□□□□ -0.18
TRBV10-3-201ENST00000611462 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
TRBV10-3-201ENST00000611462 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
TRBV10-3-201ENST00000611462 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
TRBV10-3-201ENST00000611462 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
TRBV10-3-201ENST00000611462 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
TRBV10-3-201ENST00000611462 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
TRBV10-3-201ENST00000611462 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
TRBV10-3-201ENST00000611462 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
TRBV10-3-201ENST00000611462 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
TRBV10-3-201ENST00000611462 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
TRBV10-3-201ENST00000611462 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
TRBV10-3-201ENST00000611462 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
TRBV10-3-201ENST00000611462 CUX2O14529 1486 aa13.74□□□□□ -0.21
TRBV10-3-201ENST00000611462 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
TRBV10-3-201ENST00000611462 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
TRBV10-3-201ENST00000611462 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
TRBV10-3-201ENST00000611462 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
TRBV10-3-201ENST00000611462 IGF1RP08069 1367 aa13.69□□□□□ -0.22
TRBV10-3-201ENST00000611462 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
TRBV10-3-201ENST00000611462 WDR62O43379 1518 aa13.68□□□□□ -0.22
TRBV10-3-201ENST00000611462 KIF21BO75037 1637 aa13.68□□□□□ -0.22
TRBV10-3-201ENST00000611462 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
TRBV10-3-201ENST00000611462 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
TRBV10-3-201ENST00000611462 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
TRBV10-3-201ENST00000611462 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
TRBV10-3-201ENST00000611462 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
TRBV10-3-201ENST00000611462 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
TRBV10-3-201ENST00000611462 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
TRBV10-3-201ENST00000611462 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
TRBV10-3-201ENST00000611462 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
TRBV10-3-201ENST00000611462 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
TRBV10-3-201ENST00000611462 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
TRBV10-3-201ENST00000611462 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
TRBV10-3-201ENST00000611462 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRBV10-3-201ENST00000611462 CUL7Q14999 1698 aa13.51□□□□□ -0.25
TRBV10-3-201ENST00000611462 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
TRBV10-3-201ENST00000611462 CLIP1P30622 1438 aa13.49□□□□□ -0.25
TRBV10-3-201ENST00000611462 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
TRBV10-3-201ENST00000611462 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TRBV10-3-201ENST00000611462 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
TRBV10-3-201ENST00000611462 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
TRBV10-3-201ENST00000611462 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
TRBV10-3-201ENST00000611462 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
TRBV10-3-201ENST00000611462 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
TRBV10-3-201ENST00000611462 SNAPC4Q5SXM2 1469 aa13.38□□□□□ -0.27
TRBV10-3-201ENST00000611462 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
TRBV10-3-201ENST00000611462 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
TRBV10-3-201ENST00000611462 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms