RNA–Protein interactions for RNA: ENST00000372562.1

PPCS-204, Transcript of phosphopantothenoylcysteine synthetase, humanhuman

TSL 2 BASIC

Gene PPCS, Length 966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCS-204ENST00000372562 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
PPCS-204ENST00000372562 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
PPCS-204ENST00000372562 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
PPCS-204ENST00000372562 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
PPCS-204ENST00000372562 FOXD1Q16676 465 aa22.22■■□□□ 1.15
PPCS-204ENST00000372562 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
PPCS-204ENST00000372562 MSH5O43196 834 aa20.95■□□□□ 0.94
PPCS-204ENST00000372562 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
PPCS-204ENST00000372562 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
PPCS-204ENST00000372562 ADRA2BP18089 450 aa20.59■□□□□ 0.89
PPCS-204ENST00000372562 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
PPCS-204ENST00000372562 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
PPCS-204ENST00000372562 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
PPCS-204ENST00000372562 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
PPCS-204ENST00000372562 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
PPCS-204ENST00000372562 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
PPCS-204ENST00000372562 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
PPCS-204ENST00000372562 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
PPCS-204ENST00000372562 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
PPCS-204ENST00000372562 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
PPCS-204ENST00000372562 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
PPCS-204ENST00000372562 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
PPCS-204ENST00000372562 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
PPCS-204ENST00000372562 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
PPCS-204ENST00000372562 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
PPCS-204ENST00000372562 ABCC9O60706 1549 aa17.57■□□□□ 0.4
PPCS-204ENST00000372562 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
PPCS-204ENST00000372562 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
PPCS-204ENST00000372562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
PPCS-204ENST00000372562 KCNA4P22459 653 aa17.03■□□□□ 0.32
PPCS-204ENST00000372562 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
PPCS-204ENST00000372562 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
PPCS-204ENST00000372562 CAPN15O75808 1086 aa16.67■□□□□ 0.26
PPCS-204ENST00000372562 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
PPCS-204ENST00000372562 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
PPCS-204ENST00000372562 DSG3P32926 999 aa16.64■□□□□ 0.25
PPCS-204ENST00000372562 APLP2Q06481 763 aa16.6■□□□□ 0.25
PPCS-204ENST00000372562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
PPCS-204ENST00000372562 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
PPCS-204ENST00000372562 NACADO15069 1562 aa16.53■□□□□ 0.24
PPCS-204ENST00000372562 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
PPCS-204ENST00000372562 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
PPCS-204ENST00000372562 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
PPCS-204ENST00000372562 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
PPCS-204ENST00000372562 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
PPCS-204ENST00000372562 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
PPCS-204ENST00000372562 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
PPCS-204ENST00000372562 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
PPCS-204ENST00000372562 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
PPCS-204ENST00000372562 ABCB7O75027 752 aa16.23■□□□□ 0.19
PPCS-204ENST00000372562 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
PPCS-204ENST00000372562 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
PPCS-204ENST00000372562 POTEHQ6S545 545 aa16.07■□□□□ 0.16
PPCS-204ENST00000372562 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
PPCS-204ENST00000372562 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
PPCS-204ENST00000372562 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
PPCS-204ENST00000372562 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
PPCS-204ENST00000372562 POLA2Q14181 598 aa15.93■□□□□ 0.14
PPCS-204ENST00000372562 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
PPCS-204ENST00000372562 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
PPCS-204ENST00000372562 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
PPCS-204ENST00000372562 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
PPCS-204ENST00000372562 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
PPCS-204ENST00000372562 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
PPCS-204ENST00000372562 ZBTB22O15209 634 aa15.65■□□□□ 0.1
PPCS-204ENST00000372562 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
PPCS-204ENST00000372562 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
PPCS-204ENST00000372562 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
PPCS-204ENST00000372562 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PPCS-204ENST00000372562 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
PPCS-204ENST00000372562 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
PPCS-204ENST00000372562 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
PPCS-204ENST00000372562 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
PPCS-204ENST00000372562 FBLN2P98095 1184 aa15.24■□□□□ 0.03
PPCS-204ENST00000372562 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
PPCS-204ENST00000372562 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
PPCS-204ENST00000372562 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
PPCS-204ENST00000372562 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
PPCS-204ENST00000372562 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
PPCS-204ENST00000372562 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
PPCS-204ENST00000372562 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
PPCS-204ENST00000372562 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
PPCS-204ENST00000372562 CUX2O14529 1486 aa15.14■□□□□ 0.01
PPCS-204ENST00000372562 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
PPCS-204ENST00000372562 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
PPCS-204ENST00000372562 NESP48681 1621 aa15.1■□□□□ 0.01
PPCS-204ENST00000372562 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
PPCS-204ENST00000372562 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
PPCS-204ENST00000372562 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
PPCS-204ENST00000372562 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
PPCS-204ENST00000372562 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
PPCS-204ENST00000372562 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
PPCS-204ENST00000372562 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
PPCS-204ENST00000372562 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
PPCS-204ENST00000372562 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
PPCS-204ENST00000372562 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
PPCS-204ENST00000372562 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
PPCS-204ENST00000372562 HAX1O00165 279 aa14.88□□□□□ -0.03
PPCS-204ENST00000372562 KIF21AQ7Z4S6 1674 aa14.85□□□□□ -0.03
PPCS-204ENST00000372562 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms