RNA–Protein interactions for RNA: ENST00000452879.1

TRIM60P19-201, Transcript of tripartite motif containing 60 pseudogene 19, humanhuman

BASIC

Gene TRIM60P19, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P19-201ENST00000452879 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
TRIM60P19-201ENST00000452879 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
TRIM60P19-201ENST00000452879 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
TRIM60P19-201ENST00000452879 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
TRIM60P19-201ENST00000452879 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
TRIM60P19-201ENST00000452879 FOXD1Q16676 465 aa16.2■□□□□ 0.18
TRIM60P19-201ENST00000452879 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
TRIM60P19-201ENST00000452879 MSH5O43196 834 aa15.49■□□□□ 0.07
TRIM60P19-201ENST00000452879 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
TRIM60P19-201ENST00000452879 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.04
TRIM60P19-201ENST00000452879 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
TRIM60P19-201ENST00000452879 ADRA2BP18089 450 aa14.61□□□□□ -0.07
TRIM60P19-201ENST00000452879 HRCP23327 699 aa14.58□□□□□ -0.08
TRIM60P19-201ENST00000452879 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
TRIM60P19-201ENST00000452879 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
TRIM60P19-201ENST00000452879 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
TRIM60P19-201ENST00000452879 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
TRIM60P19-201ENST00000452879 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
TRIM60P19-201ENST00000452879 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
TRIM60P19-201ENST00000452879 MYT1Q01538 1121 aa14.06□□□□□ -0.16
TRIM60P19-201ENST00000452879 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
TRIM60P19-201ENST00000452879 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.16
TRIM60P19-201ENST00000452879 MYO15BQ96JP2 1530 aa13.99□□□□□ -0.17
TRIM60P19-201ENST00000452879 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
TRIM60P19-201ENST00000452879 PPARGC1BQ86YN6 1023 aaKnown RBP13.75□□□□□ -0.21
TRIM60P19-201ENST00000452879 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
TRIM60P19-201ENST00000452879 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
TRIM60P19-201ENST00000452879 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
TRIM60P19-201ENST00000452879 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
TRIM60P19-201ENST00000452879 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
TRIM60P19-201ENST00000452879 ABCC9O60706 1549 aa13.46□□□□□ -0.26
TRIM60P19-201ENST00000452879 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
TRIM60P19-201ENST00000452879 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
TRIM60P19-201ENST00000452879 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
TRIM60P19-201ENST00000452879 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
TRIM60P19-201ENST00000452879 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
TRIM60P19-201ENST00000452879 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
TRIM60P19-201ENST00000452879 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
TRIM60P19-201ENST00000452879 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
TRIM60P19-201ENST00000452879 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.29
TRIM60P19-201ENST00000452879 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
TRIM60P19-201ENST00000452879 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
TRIM60P19-201ENST00000452879 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
TRIM60P19-201ENST00000452879 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
TRIM60P19-201ENST00000452879 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
TRIM60P19-201ENST00000452879 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
TRIM60P19-201ENST00000452879 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
TRIM60P19-201ENST00000452879 EEA1Q15075 1411 aa13.05□□□□□ -0.32
TRIM60P19-201ENST00000452879 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
TRIM60P19-201ENST00000452879 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
TRIM60P19-201ENST00000452879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.34
TRIM60P19-201ENST00000452879 NACADO15069 1562 aa12.95□□□□□ -0.34
TRIM60P19-201ENST00000452879 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
TRIM60P19-201ENST00000452879 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
TRIM60P19-201ENST00000452879 FAM9AQ8IZU1 332 aaPredicted RBP12.9□□□□□ -0.34
TRIM60P19-201ENST00000452879 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
TRIM60P19-201ENST00000452879 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
TRIM60P19-201ENST00000452879 CEP162Q5TB80 1403 aa12.85□□□□□ -0.35
TRIM60P19-201ENST00000452879 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
TRIM60P19-201ENST00000452879 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
TRIM60P19-201ENST00000452879 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
TRIM60P19-201ENST00000452879 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
TRIM60P19-201ENST00000452879 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
TRIM60P19-201ENST00000452879 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
TRIM60P19-201ENST00000452879 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
TRIM60P19-201ENST00000452879 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
TRIM60P19-201ENST00000452879 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
TRIM60P19-201ENST00000452879 MIER1Q8N108 512 aa12.72□□□□□ -0.37
TRIM60P19-201ENST00000452879 WIZO95785 1651 aa12.72□□□□□ -0.37
TRIM60P19-201ENST00000452879 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
TRIM60P19-201ENST00000452879 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
TRIM60P19-201ENST00000452879 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
TRIM60P19-201ENST00000452879 KIF21BO75037 1637 aa12.67□□□□□ -0.38
TRIM60P19-201ENST00000452879 CCDC88BA6NC98 1476 aa12.64□□□□□ -0.39
TRIM60P19-201ENST00000452879 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
TRIM60P19-201ENST00000452879 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
TRIM60P19-201ENST00000452879 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
TRIM60P19-201ENST00000452879 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
TRIM60P19-201ENST00000452879 APLP2Q06481 763 aa12.57□□□□□ -0.4
TRIM60P19-201ENST00000452879 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
TRIM60P19-201ENST00000452879 SOGA1O94964 1423 aa12.57□□□□□ -0.4
TRIM60P19-201ENST00000452879 CUX2O14529 1486 aa12.56□□□□□ -0.4
TRIM60P19-201ENST00000452879 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
TRIM60P19-201ENST00000452879 CLIP1P30622 1438 aa12.54□□□□□ -0.4
TRIM60P19-201ENST00000452879 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
TRIM60P19-201ENST00000452879 MYT1LQ9UL68 1186 aa12.54□□□□□ -0.4
TRIM60P19-201ENST00000452879 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
TRIM60P19-201ENST00000452879 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
TRIM60P19-201ENST00000452879 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
TRIM60P19-201ENST00000452879 DHX57Q6P158 1386 aaKnown RBP12.5□□□□□ -0.41
TRIM60P19-201ENST00000452879 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
TRIM60P19-201ENST00000452879 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
TRIM60P19-201ENST00000452879 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
TRIM60P19-201ENST00000452879 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
TRIM60P19-201ENST00000452879 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
TRIM60P19-201ENST00000452879 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
TRIM60P19-201ENST00000452879 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
TRIM60P19-201ENST00000452879 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
TRIM60P19-201ENST00000452879 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
TRIM60P19-201ENST00000452879 POTEHQ6S545 545 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms