RNA–Protein interactions for RNA: ENST00000502978.1

MSANTD3-TMEFF1-201, Transcript of MSANTD3-TMEFF1 readthrough, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MSANTD3-TMEFF1, Length 2,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1-201ENST00000502978 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
MSANTD3-TMEFF1-201ENST00000502978 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
MSANTD3-TMEFF1-201ENST00000502978 ABCC9O60706 1549 aa16.49■□□□□ 0.23
MSANTD3-TMEFF1-201ENST00000502978 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
MSANTD3-TMEFF1-201ENST00000502978 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.21
MSANTD3-TMEFF1-201ENST00000502978 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
MSANTD3-TMEFF1-201ENST00000502978 NACADO15069 1562 aa15.96■□□□□ 0.15
MSANTD3-TMEFF1-201ENST00000502978 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
MSANTD3-TMEFF1-201ENST00000502978 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
MSANTD3-TMEFF1-201ENST00000502978 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
MSANTD3-TMEFF1-201ENST00000502978 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
MSANTD3-TMEFF1-201ENST00000502978 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
MSANTD3-TMEFF1-201ENST00000502978 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
MSANTD3-TMEFF1-201ENST00000502978 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
MSANTD3-TMEFF1-201ENST00000502978 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
MSANTD3-TMEFF1-201ENST00000502978 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
MSANTD3-TMEFF1-201ENST00000502978 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
MSANTD3-TMEFF1-201ENST00000502978 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
MSANTD3-TMEFF1-201ENST00000502978 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
MSANTD3-TMEFF1-201ENST00000502978 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
MSANTD3-TMEFF1-201ENST00000502978 SMARCA4P51532 1647 aa15.05■□□□□ -0
MSANTD3-TMEFF1-201ENST00000502978 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
MSANTD3-TMEFF1-201ENST00000502978 WIZO95785 1651 aa14.99□□□□□ -0.01
MSANTD3-TMEFF1-201ENST00000502978 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
MSANTD3-TMEFF1-201ENST00000502978 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
MSANTD3-TMEFF1-201ENST00000502978 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.03
MSANTD3-TMEFF1-201ENST00000502978 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
MSANTD3-TMEFF1-201ENST00000502978 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
MSANTD3-TMEFF1-201ENST00000502978 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
MSANTD3-TMEFF1-201ENST00000502978 NCAPD3P42695 1498 aa14.77□□□□□ -0.05
MSANTD3-TMEFF1-201ENST00000502978 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
MSANTD3-TMEFF1-201ENST00000502978 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
MSANTD3-TMEFF1-201ENST00000502978 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
MSANTD3-TMEFF1-201ENST00000502978 CHIC1Q5VXU3 224 aa14.43□□□□□ -0.1
MSANTD3-TMEFF1-201ENST00000502978 NESP48681 1621 aa14.41□□□□□ -0.1
MSANTD3-TMEFF1-201ENST00000502978 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
MSANTD3-TMEFF1-201ENST00000502978 CFTRP13569 1480 aa14.38□□□□□ -0.11
MSANTD3-TMEFF1-201ENST00000502978 ABCC8Q09428 1581 aa14.31□□□□□ -0.12
MSANTD3-TMEFF1-201ENST00000502978 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
MSANTD3-TMEFF1-201ENST00000502978 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
MSANTD3-TMEFF1-201ENST00000502978 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
MSANTD3-TMEFF1-201ENST00000502978 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
MSANTD3-TMEFF1-201ENST00000502978 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
MSANTD3-TMEFF1-201ENST00000502978 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
MSANTD3-TMEFF1-201ENST00000502978 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
MSANTD3-TMEFF1-201ENST00000502978 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
MSANTD3-TMEFF1-201ENST00000502978 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
MSANTD3-TMEFF1-201ENST00000502978 CUX1P39880 1505 aa14.13□□□□□ -0.15
MSANTD3-TMEFF1-201ENST00000502978 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
MSANTD3-TMEFF1-201ENST00000502978 URB2Q14146 1524 aaKnown RBP14.09□□□□□ -0.15
MSANTD3-TMEFF1-201ENST00000502978 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
MSANTD3-TMEFF1-201ENST00000502978 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 SOGA1O94964 1423 aa14□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
MSANTD3-TMEFF1-201ENST00000502978 WDR62O43379 1518 aa13.95□□□□□ -0.18
MSANTD3-TMEFF1-201ENST00000502978 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
MSANTD3-TMEFF1-201ENST00000502978 CUX2O14529 1486 aa13.91□□□□□ -0.18
MSANTD3-TMEFF1-201ENST00000502978 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
MSANTD3-TMEFF1-201ENST00000502978 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.2
MSANTD3-TMEFF1-201ENST00000502978 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■□□ 18.3
MSANTD3-TMEFF1-201ENST00000502978 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
MSANTD3-TMEFF1-201ENST00000502978 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
MSANTD3-TMEFF1-201ENST00000502978 EEA1Q15075 1411 aa13.79□□□□□ -0.2
MSANTD3-TMEFF1-201ENST00000502978 IGF1RP08069 1367 aa13.78□□□□□ -0.2
MSANTD3-TMEFF1-201ENST00000502978 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
MSANTD3-TMEFF1-201ENST00000502978 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
MSANTD3-TMEFF1-201ENST00000502978 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
MSANTD3-TMEFF1-201ENST00000502978 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.21
MSANTD3-TMEFF1-201ENST00000502978 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 UBTFP17480 764 aaKnown RBP13.68□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 KIF21BO75037 1637 aa13.65□□□□□ -0.22
MSANTD3-TMEFF1-201ENST00000502978 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 FBLN2P98095 1184 aa13.62□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 CUL7Q14999 1698 aa13.61□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
MSANTD3-TMEFF1-201ENST00000502978 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
MSANTD3-TMEFF1-201ENST00000502978 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
MSANTD3-TMEFF1-201ENST00000502978 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
MSANTD3-TMEFF1-201ENST00000502978 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms