RNA–Protein interactions for RNA: ENST00000393389.7

ANKRD42-202, Transcript of ankyrin repeat domain 42, humanhuman

TSL 1 (best) BASIC

Gene ANKRD42, Length 4,066 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42-202ENST00000393389 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
ANKRD42-202ENST00000393389 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
ANKRD42-202ENST00000393389 SUPT5HO00267 1087 aaKnown RBP15.02□□□□□ -0.01
ANKRD42-202ENST00000393389 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
ANKRD42-202ENST00000393389 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
ANKRD42-202ENST00000393389 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
ANKRD42-202ENST00000393389 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
ANKRD42-202ENST00000393389 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.19
ANKRD42-202ENST00000393389 TTBK1Q5TCY1 1321 aaPredicted RBP13.89□□□□□ -0.19
ANKRD42-202ENST00000393389 CHIC1Q5VXU3 224 aa13.88□□□□□ -0.19
ANKRD42-202ENST00000393389 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
ANKRD42-202ENST00000393389 HRCP23327 699 aa13.78□□□□□ -0.2
ANKRD42-202ENST00000393389 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
ANKRD42-202ENST00000393389 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
ANKRD42-202ENST00000393389 TRIM26Q12899 539 aaPredicted RBP13.52□□□□□ -0.25
ANKRD42-202ENST00000393389 CCER1Q8TC90 406 aaPredicted RBP13.49□□□□□ -0.25
ANKRD42-202ENST00000393389 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
ANKRD42-202ENST00000393389 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
ANKRD42-202ENST00000393389 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
ANKRD42-202ENST00000393389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
ANKRD42-202ENST00000393389 YTHDC1Q96MU7 727 aaKnown RBP13.32□□□□□ -0.28
ANKRD42-202ENST00000393389 APLP2Q06481 763 aa13.29□□□□□ -0.28
ANKRD42-202ENST00000393389 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
ANKRD42-202ENST00000393389 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
ANKRD42-202ENST00000393389 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
ANKRD42-202ENST00000393389 ABCC9O60706 1549 aa13.1□□□□□ -0.31
ANKRD42-202ENST00000393389 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
ANKRD42-202ENST00000393389 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.32
ANKRD42-202ENST00000393389 ITGAEP38570 1179 aa13.02□□□□□ -0.33
ANKRD42-202ENST00000393389 DIEXFQ68CQ4 756 aaKnown RBP13.02□□□□□ -0.33
ANKRD42-202ENST00000393389 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
ANKRD42-202ENST00000393389 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
ANKRD42-202ENST00000393389 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
ANKRD42-202ENST00000393389 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
ANKRD42-202ENST00000393389 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
ANKRD42-202ENST00000393389 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
ANKRD42-202ENST00000393389 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
ANKRD42-202ENST00000393389 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
ANKRD42-202ENST00000393389 ACIN1Q9UKV3 1341 aaKnown RBP12.78□□□□□ -0.36
ANKRD42-202ENST00000393389 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
ANKRD42-202ENST00000393389 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
ANKRD42-202ENST00000393389 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
ANKRD42-202ENST00000393389 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
ANKRD42-202ENST00000393389 BCANQ96GW7 911 aa12.64□□□□□ -0.39
ANKRD42-202ENST00000393389 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
ANKRD42-202ENST00000393389 NEFLP07196 543 aa12.58□□□□□ -0.39
ANKRD42-202ENST00000393389 MIER1Q8N108 512 aa12.58□□□□□ -0.4
ANKRD42-202ENST00000393389 P3H3Q8IVL6 736 aa12.58□□□□□ -0.4
ANKRD42-202ENST00000393389 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
ANKRD42-202ENST00000393389 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
ANKRD42-202ENST00000393389 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
ANKRD42-202ENST00000393389 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
ANKRD42-202ENST00000393389 SOGA1O94964 1423 aa12.45□□□□□ -0.42
ANKRD42-202ENST00000393389 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
ANKRD42-202ENST00000393389 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
ANKRD42-202ENST00000393389 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
ANKRD42-202ENST00000393389 ABCC8Q09428 1581 aa12.4□□□□□ -0.43
ANKRD42-202ENST00000393389 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
ANKRD42-202ENST00000393389 CLIP1P30622 1438 aa12.38□□□□□ -0.43
ANKRD42-202ENST00000393389 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
ANKRD42-202ENST00000393389 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
ANKRD42-202ENST00000393389 MYT1Q01538 1121 aa12.35□□□□□ -0.43
ANKRD42-202ENST00000393389 NACADO15069 1562 aa12.34□□□□□ -0.43
ANKRD42-202ENST00000393389 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
ANKRD42-202ENST00000393389 WIZO95785 1651 aa12.31□□□□□ -0.44
ANKRD42-202ENST00000393389 FKBP8Q14318 412 aa12.3□□□□□ -0.44
ANKRD42-202ENST00000393389 WRNQ14191 1432 aaPredicted RBP eCLIP12.3□□□□□ -0.44
ANKRD42-202ENST00000393389 ANP32CO43423 234 aa12.28□□□□□ -0.44
ANKRD42-202ENST00000393389 ZNF326Q5BKZ1 582 aaKnown RBP12.28□□□□□ -0.44
ANKRD42-202ENST00000393389 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
ANKRD42-202ENST00000393389 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
ANKRD42-202ENST00000393389 KANK4Q5T7N3 995 aaPredicted RBP12.22□□□□□ -0.45
ANKRD42-202ENST00000393389 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
ANKRD42-202ENST00000393389 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
ANKRD42-202ENST00000393389 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
ANKRD42-202ENST00000393389 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.46
ANKRD42-202ENST00000393389 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
ANKRD42-202ENST00000393389 EEA1Q15075 1411 aa12.17□□□□□ -0.46
ANKRD42-202ENST00000393389 HNRNPUQ00839 825 aaKnown RBP eCLIP12.16□□□□□ -0.46
ANKRD42-202ENST00000393389 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.47
ANKRD42-202ENST00000393389 FBLN2P98095 1184 aa12.12□□□□□ -0.47
ANKRD42-202ENST00000393389 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
ANKRD42-202ENST00000393389 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
ANKRD42-202ENST00000393389 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
ANKRD42-202ENST00000393389 SUPT16HQ9Y5B9 1047 aaKnown RBP12.11□□□□□ -0.47
ANKRD42-202ENST00000393389 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
ANKRD42-202ENST00000393389 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
ANKRD42-202ENST00000393389 RRP7BPQ9NSQ0 103 aa12.09□□□□□ -0.47
ANKRD42-202ENST00000393389 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
ANKRD42-202ENST00000393389 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
ANKRD42-202ENST00000393389 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
ANKRD42-202ENST00000393389 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
ANKRD42-202ENST00000393389 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
ANKRD42-202ENST00000393389 CCNB3Q8WWL7 1395 aa12.01□□□□□ -0.49
ANKRD42-202ENST00000393389 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
ANKRD42-202ENST00000393389 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
ANKRD42-202ENST00000393389 KIF27Q86VH2 1401 aa12□□□□□ -0.49
ANKRD42-202ENST00000393389 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
ANKRD42-202ENST00000393389 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
ANKRD42-202ENST00000393389 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms