RNA–Protein interactions for RNA: ENST00000409420.1

CSRNP3-203, Transcript of cysteine and serine rich nuclear protein 3, humanhuman

TSL 5 BASIC

Gene CSRNP3, Length 2,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRNP3-203ENST00000409420 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
CSRNP3-203ENST00000409420 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
CSRNP3-203ENST00000409420 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
CSRNP3-203ENST00000409420 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
CSRNP3-203ENST00000409420 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
CSRNP3-203ENST00000409420 ZCCHC6Q5VYS8 1495 aaKnown RBP14.9□□□□□ -0.02
CSRNP3-203ENST00000409420 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
CSRNP3-203ENST00000409420 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
CSRNP3-203ENST00000409420 ABCC9O60706 1549 aa14.72□□□□□ -0.05
CSRNP3-203ENST00000409420 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
CSRNP3-203ENST00000409420 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
CSRNP3-203ENST00000409420 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.07
CSRNP3-203ENST00000409420 HRCP23327 699 aa14.54□□□□□ -0.08
CSRNP3-203ENST00000409420 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
CSRNP3-203ENST00000409420 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
CSRNP3-203ENST00000409420 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
CSRNP3-203ENST00000409420 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
CSRNP3-203ENST00000409420 NACADO15069 1562 aa14.16□□□□□ -0.14
CSRNP3-203ENST00000409420 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
CSRNP3-203ENST00000409420 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
CSRNP3-203ENST00000409420 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.15
CSRNP3-203ENST00000409420 RB1CC1Q8TDY2 1594 aa14.07□□□□□ -0.16
CSRNP3-203ENST00000409420 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
CSRNP3-203ENST00000409420 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
CSRNP3-203ENST00000409420 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
CSRNP3-203ENST00000409420 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
CSRNP3-203ENST00000409420 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
CSRNP3-203ENST00000409420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
CSRNP3-203ENST00000409420 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
CSRNP3-203ENST00000409420 WIZO95785 1651 aa13.78□□□□□ -0.2
CSRNP3-203ENST00000409420 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
CSRNP3-203ENST00000409420 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
CSRNP3-203ENST00000409420 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
CSRNP3-203ENST00000409420 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
CSRNP3-203ENST00000409420 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
CSRNP3-203ENST00000409420 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
CSRNP3-203ENST00000409420 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
CSRNP3-203ENST00000409420 SOGA1O94964 1423 aa13.54□□□□□ -0.24
CSRNP3-203ENST00000409420 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
CSRNP3-203ENST00000409420 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
CSRNP3-203ENST00000409420 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
CSRNP3-203ENST00000409420 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
CSRNP3-203ENST00000409420 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
CSRNP3-203ENST00000409420 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
CSRNP3-203ENST00000409420 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
CSRNP3-203ENST00000409420 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
CSRNP3-203ENST00000409420 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
CSRNP3-203ENST00000409420 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.27
CSRNP3-203ENST00000409420 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
CSRNP3-203ENST00000409420 DIEXFQ68CQ4 756 aaKnown RBP13.38□□□□□ -0.27
CSRNP3-203ENST00000409420 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.27
CSRNP3-203ENST00000409420 YTHDC1Q96MU7 727 aaKnown RBP13.32□□□□□ -0.28
CSRNP3-203ENST00000409420 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
CSRNP3-203ENST00000409420 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
CSRNP3-203ENST00000409420 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
CSRNP3-203ENST00000409420 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
CSRNP3-203ENST00000409420 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
CSRNP3-203ENST00000409420 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
CSRNP3-203ENST00000409420 MIER1Q8N108 512 aa13.18□□□□□ -0.3
CSRNP3-203ENST00000409420 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
CSRNP3-203ENST00000409420 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
CSRNP3-203ENST00000409420 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
CSRNP3-203ENST00000409420 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
CSRNP3-203ENST00000409420 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
CSRNP3-203ENST00000409420 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
CSRNP3-203ENST00000409420 CLIP1P30622 1438 aa13.13□□□□□ -0.31
CSRNP3-203ENST00000409420 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
CSRNP3-203ENST00000409420 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
CSRNP3-203ENST00000409420 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
CSRNP3-203ENST00000409420 APLP2Q06481 763 aa13.07□□□□□ -0.32
CSRNP3-203ENST00000409420 EEA1Q15075 1411 aa13.07□□□□□ -0.32
CSRNP3-203ENST00000409420 ITGAEP38570 1179 aa13.05□□□□□ -0.32
CSRNP3-203ENST00000409420 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
CSRNP3-203ENST00000409420 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
CSRNP3-203ENST00000409420 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CSRNP3-203ENST00000409420 NESP48681 1621 aa12.99□□□□□ -0.33
CSRNP3-203ENST00000409420 KIF21BO75037 1637 aa12.98□□□□□ -0.33
CSRNP3-203ENST00000409420 CFTRP13569 1480 aa12.95□□□□□ -0.34
CSRNP3-203ENST00000409420 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
CSRNP3-203ENST00000409420 CUX1P39880 1505 aa12.91□□□□□ -0.34
CSRNP3-203ENST00000409420 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
CSRNP3-203ENST00000409420 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
CSRNP3-203ENST00000409420 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
CSRNP3-203ENST00000409420 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
CSRNP3-203ENST00000409420 TOP2BQ02880 1626 aa12.86□□□□□ -0.35
CSRNP3-203ENST00000409420 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
CSRNP3-203ENST00000409420 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
CSRNP3-203ENST00000409420 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
CSRNP3-203ENST00000409420 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
CSRNP3-203ENST00000409420 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
CSRNP3-203ENST00000409420 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
CSRNP3-203ENST00000409420 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
CSRNP3-203ENST00000409420 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
CSRNP3-203ENST00000409420 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
CSRNP3-203ENST00000409420 FAM50AQ14320 339 aaKnown RBP12.75□□□□□ -0.37
CSRNP3-203ENST00000409420 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
CSRNP3-203ENST00000409420 CUX2O14529 1486 aa12.74□□□□□ -0.37
CSRNP3-203ENST00000409420 CCNB3Q8WWL7 1395 aa12.74□□□□□ -0.37
CSRNP3-203ENST00000409420 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
CSRNP3-203ENST00000409420 IGF1RP08069 1367 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms