RNA–Protein interactions for RNA: ENST00000378016.4

SSPO-201, Transcript of SCO-spondin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSPO, Length 15,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-201ENST00000378016 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
SSPO-201ENST00000378016 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
SSPO-201ENST00000378016 MYT1Q01538 1121 aa13.74□□□□□ -0.21
SSPO-201ENST00000378016 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
SSPO-201ENST00000378016 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
SSPO-201ENST00000378016 PCGF6Q9BYE7 350 aa13.43□□□□□ -0.26
SSPO-201ENST00000378016 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
SSPO-201ENST00000378016 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
SSPO-201ENST00000378016 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
SSPO-201ENST00000378016 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
SSPO-201ENST00000378016 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
SSPO-201ENST00000378016 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
SSPO-201ENST00000378016 APLP2Q06481 763 aa13.03□□□□□ -0.32
SSPO-201ENST00000378016 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.32
SSPO-201ENST00000378016 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
SSPO-201ENST00000378016 NEFLP07196 543 aa12.94□□□□□ -0.34
SSPO-201ENST00000378016 HRCP23327 699 aa12.83□□□□□ -0.35
SSPO-201ENST00000378016 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
SSPO-201ENST00000378016 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
SSPO-201ENST00000378016 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
SSPO-201ENST00000378016 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.39
SSPO-201ENST00000378016 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
SSPO-201ENST00000378016 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
SSPO-201ENST00000378016 RTL5Q5HYW3 569 aaPredicted RBP12.48□□□□□ -0.41
SSPO-201ENST00000378016 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
SSPO-201ENST00000378016 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
SSPO-201ENST00000378016 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
SSPO-201ENST00000378016 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
SSPO-201ENST00000378016 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
SSPO-201ENST00000378016 BCANQ96GW7 911 aa12.35□□□□□ -0.43
SSPO-201ENST00000378016 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
SSPO-201ENST00000378016 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
SSPO-201ENST00000378016 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
SSPO-201ENST00000378016 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
SSPO-201ENST00000378016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.24□□□□□ -0.45
SSPO-201ENST00000378016 ITGAEP38570 1179 aa12.22□□□□□ -0.45
SSPO-201ENST00000378016 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
SSPO-201ENST00000378016 CLSPNQ9HAW4 1339 aa12.2□□□□□ -0.46
SSPO-201ENST00000378016 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
SSPO-201ENST00000378016 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
SSPO-201ENST00000378016 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
SSPO-201ENST00000378016 ANP32CO43423 234 aa11.97□□□□□ -0.49
SSPO-201ENST00000378016 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
SSPO-201ENST00000378016 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
SSPO-201ENST00000378016 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
SSPO-201ENST00000378016 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
SSPO-201ENST00000378016 NBR1Q14596 966 aa11.91□□□□□ -0.5
SSPO-201ENST00000378016 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
SSPO-201ENST00000378016 NISCHQ9Y2I1 1504 aa11.88□□□□□ -0.51
SSPO-201ENST00000378016 FKBP8Q14318 412 aa11.88□□□□□ -0.51
SSPO-201ENST00000378016 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
SSPO-201ENST00000378016 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
SSPO-201ENST00000378016 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
SSPO-201ENST00000378016 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
SSPO-201ENST00000378016 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
SSPO-201ENST00000378016 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
SSPO-201ENST00000378016 ANP32EQ9BTT0 268 aa11.74□□□□□ -0.53
SSPO-201ENST00000378016 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
SSPO-201ENST00000378016 ARXQ96QS3 562 aa11.68□□□□□ -0.54
SSPO-201ENST00000378016 ZNF326Q5BKZ1 582 aaKnown RBP11.66□□□□□ -0.54
SSPO-201ENST00000378016 MIER1Q8N108 512 aa11.65□□□□□ -0.54
SSPO-201ENST00000378016 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
SSPO-201ENST00000378016 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
SSPO-201ENST00000378016 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
SSPO-201ENST00000378016 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
SSPO-201ENST00000378016 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
SSPO-201ENST00000378016 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
SSPO-201ENST00000378016 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
SSPO-201ENST00000378016 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSPO-201ENST00000378016 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
SSPO-201ENST00000378016 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
SSPO-201ENST00000378016 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
SSPO-201ENST00000378016 NAP1L5Q96NT1 182 aaPredicted RBP11.49□□□□□ -0.57
SSPO-201ENST00000378016 NEFMP07197 916 aa11.49□□□□□ -0.57
SSPO-201ENST00000378016 ERICH6BQ5W0A0 696 aa11.48□□□□□ -0.57
SSPO-201ENST00000378016 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
SSPO-201ENST00000378016 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.57
SSPO-201ENST00000378016 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
SSPO-201ENST00000378016 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
SSPO-201ENST00000378016 BECN1Q14457 450 aa11.4□□□□□ -0.58
SSPO-201ENST00000378016 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.59
SSPO-201ENST00000378016 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
SSPO-201ENST00000378016 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
SSPO-201ENST00000378016 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
SSPO-201ENST00000378016 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
SSPO-201ENST00000378016 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
SSPO-201ENST00000378016 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
SSPO-201ENST00000378016 NCLP19338 710 aaKnown RBP11.35□□□□□ -0.59
SSPO-201ENST00000378016 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
SSPO-201ENST00000378016 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
SSPO-201ENST00000378016 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
SSPO-201ENST00000378016 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
SSPO-201ENST00000378016 RBM19Q9Y4C8 960 aaKnown RBP11.3□□□□□ -0.6
SSPO-201ENST00000378016 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
SSPO-201ENST00000378016 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
SSPO-201ENST00000378016 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
SSPO-201ENST00000378016 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.6
SSPO-201ENST00000378016 SENP3-EIF4A1A0A087X0R7 540 aa11.26□□□□□ -0.61
SSPO-201ENST00000378016 ARID3CA6NKF2 412 aa11.26□□□□□ -0.61
SSPO-201ENST00000378016 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms