RNA–Protein interactions for RNA: ENST00000354955.4

FMOD-201, Transcript of fibromodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FMOD, Length 3,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-201ENST00000354955 NISCHQ9Y2I1 1504 aa15.76■□□□□ 0.11
FMOD-201ENST00000354955 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
FMOD-201ENST00000354955 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
FMOD-201ENST00000354955 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
FMOD-201ENST00000354955 PCGF6Q9BYE7 350 aa14.64□□□□□ -0.07
FMOD-201ENST00000354955 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
FMOD-201ENST00000354955 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
FMOD-201ENST00000354955 HRCP23327 699 aa14.32□□□□□ -0.12
FMOD-201ENST00000354955 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
FMOD-201ENST00000354955 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
FMOD-201ENST00000354955 FAM9AQ8IZU1 332 aaPredicted RBP14.11□□□□□ -0.15
FMOD-201ENST00000354955 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
FMOD-201ENST00000354955 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
FMOD-201ENST00000354955 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
FMOD-201ENST00000354955 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
FMOD-201ENST00000354955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
FMOD-201ENST00000354955 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
FMOD-201ENST00000354955 YTHDC1Q96MU7 727 aaKnown RBP13.61□□□□□ -0.23
FMOD-201ENST00000354955 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
FMOD-201ENST00000354955 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.26
FMOD-201ENST00000354955 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
FMOD-201ENST00000354955 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
FMOD-201ENST00000354955 RANGAP1P46060 587 aaPredicted RBP13.42□□□□□ -0.26
FMOD-201ENST00000354955 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
FMOD-201ENST00000354955 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
FMOD-201ENST00000354955 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
FMOD-201ENST00000354955 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
FMOD-201ENST00000354955 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
FMOD-201ENST00000354955 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.3
FMOD-201ENST00000354955 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
FMOD-201ENST00000354955 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
FMOD-201ENST00000354955 MIER1Q8N108 512 aa13.01□□□□□ -0.33
FMOD-201ENST00000354955 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
FMOD-201ENST00000354955 MYT1Q01538 1121 aa12.98□□□□□ -0.33
FMOD-201ENST00000354955 BCANQ96GW7 911 aa12.96□□□□□ -0.33
FMOD-201ENST00000354955 ITGAEP38570 1179 aa12.94□□□□□ -0.34
FMOD-201ENST00000354955 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
FMOD-201ENST00000354955 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
FMOD-201ENST00000354955 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
FMOD-201ENST00000354955 APLP2Q06481 763 aa12.84□□□□□ -0.35
FMOD-201ENST00000354955 RB1CC1Q8TDY2 1594 aa12.8□□□□□ -0.36
FMOD-201ENST00000354955 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
FMOD-201ENST00000354955 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
FMOD-201ENST00000354955 ABCC9O60706 1549 aa12.71□□□□□ -0.37
FMOD-201ENST00000354955 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
FMOD-201ENST00000354955 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FMOD-201ENST00000354955 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
FMOD-201ENST00000354955 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
FMOD-201ENST00000354955 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
FMOD-201ENST00000354955 SOGA1O94964 1423 aa12.63□□□□□ -0.39
FMOD-201ENST00000354955 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
FMOD-201ENST00000354955 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
FMOD-201ENST00000354955 ABCC8Q09428 1581 aa12.58□□□□□ -0.39
FMOD-201ENST00000354955 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
FMOD-201ENST00000354955 FKBP8Q14318 412 aa12.57□□□□□ -0.4
FMOD-201ENST00000354955 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
FMOD-201ENST00000354955 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
FMOD-201ENST00000354955 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
FMOD-201ENST00000354955 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
FMOD-201ENST00000354955 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
FMOD-201ENST00000354955 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.4
FMOD-201ENST00000354955 BCL11AQ9H165 835 aa12.52□□□□□ -0.41
FMOD-201ENST00000354955 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
FMOD-201ENST00000354955 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
FMOD-201ENST00000354955 WIZO95785 1651 aa12.45□□□□□ -0.42
FMOD-201ENST00000354955 FAM50AQ14320 339 aaKnown RBP12.43□□□□□ -0.42
FMOD-201ENST00000354955 NEFLP07196 543 aa12.42□□□□□ -0.42
FMOD-201ENST00000354955 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
FMOD-201ENST00000354955 SIN3AQ96ST3 1273 aa12.41□□□□□ -0.42
FMOD-201ENST00000354955 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
FMOD-201ENST00000354955 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
FMOD-201ENST00000354955 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
FMOD-201ENST00000354955 CLIP1P30622 1438 aa12.34□□□□□ -0.43
FMOD-201ENST00000354955 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
FMOD-201ENST00000354955 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
FMOD-201ENST00000354955 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
FMOD-201ENST00000354955 ARID3CA6NKF2 412 aa12.27□□□□□ -0.45
FMOD-201ENST00000354955 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
FMOD-201ENST00000354955 NBR1Q14596 966 aa12.25□□□□□ -0.45
FMOD-201ENST00000354955 ANP32CO43423 234 aa12.22□□□□□ -0.45
FMOD-201ENST00000354955 GOLGA3Q08378 1498 aa12.21□□□□□ -0.46
FMOD-201ENST00000354955 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
FMOD-201ENST00000354955 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
FMOD-201ENST00000354955 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
FMOD-201ENST00000354955 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
FMOD-201ENST00000354955 BAZ1BQ9UIG0 1483 aaKnown RBP12.16□□□□□ -0.46
FMOD-201ENST00000354955 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
FMOD-201ENST00000354955 CHIC2Q9UKJ5 165 aa12.13□□□□□ -0.47
FMOD-201ENST00000354955 CDK11AQ9UQ88 783 aaPredicted RBP12.12□□□□□ -0.47
FMOD-201ENST00000354955 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
FMOD-201ENST00000354955 MSH5O43196 834 aa12.11□□□□□ -0.47
FMOD-201ENST00000354955 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
FMOD-201ENST00000354955 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
FMOD-201ENST00000354955 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
FMOD-201ENST00000354955 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
FMOD-201ENST00000354955 RAB3GAP2Q9H2M9 1393 aa12.06□□□□□ -0.48
FMOD-201ENST00000354955 FOXD1Q16676 465 aa12.05□□□□□ -0.48
FMOD-201ENST00000354955 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
FMOD-201ENST00000354955 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
FMOD-201ENST00000354955 CCNB3Q8WWL7 1395 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms