RNA–Protein interactions for RNA: ENST00000370994.8

SERBP1-203, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SERBP1, Length 6,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-203ENST00000370994 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.13
SERBP1-203ENST00000370994 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
SERBP1-203ENST00000370994 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
SERBP1-203ENST00000370994 TTBK1Q5TCY1 1321 aaPredicted RBP14.61□□□□□ -0.07
SERBP1-203ENST00000370994 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
SERBP1-203ENST00000370994 RANGAP1P46060 587 aaPredicted RBP14.35□□□□□ -0.11
SERBP1-203ENST00000370994 FAM9AQ8IZU1 332 aaPredicted RBP14.11□□□□□ -0.15
SERBP1-203ENST00000370994 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
SERBP1-203ENST00000370994 CHIC1Q5VXU3 224 aa13.81□□□□□ -0.2
SERBP1-203ENST00000370994 PPARGC1BQ86YN6 1023 aaKnown RBP13.8□□□□□ -0.2
SERBP1-203ENST00000370994 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
SERBP1-203ENST00000370994 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
SERBP1-203ENST00000370994 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
SERBP1-203ENST00000370994 APLP2Q06481 763 aa13.61□□□□□ -0.23
SERBP1-203ENST00000370994 MYT1Q01538 1121 aa13.56□□□□□ -0.24
SERBP1-203ENST00000370994 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
SERBP1-203ENST00000370994 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
SERBP1-203ENST00000370994 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
SERBP1-203ENST00000370994 ITGAEP38570 1179 aa13.36□□□□□ -0.27
SERBP1-203ENST00000370994 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
SERBP1-203ENST00000370994 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
SERBP1-203ENST00000370994 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
SERBP1-203ENST00000370994 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
SERBP1-203ENST00000370994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
SERBP1-203ENST00000370994 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
SERBP1-203ENST00000370994 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
SERBP1-203ENST00000370994 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
SERBP1-203ENST00000370994 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
SERBP1-203ENST00000370994 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
SERBP1-203ENST00000370994 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
SERBP1-203ENST00000370994 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
SERBP1-203ENST00000370994 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
SERBP1-203ENST00000370994 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
SERBP1-203ENST00000370994 NEFLP07196 543 aa12.85□□□□□ -0.35
SERBP1-203ENST00000370994 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
SERBP1-203ENST00000370994 BCANQ96GW7 911 aa12.79□□□□□ -0.36
SERBP1-203ENST00000370994 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
SERBP1-203ENST00000370994 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
SERBP1-203ENST00000370994 FBLN2P98095 1184 aa12.73□□□□□ -0.37
SERBP1-203ENST00000370994 DAXXQ9UER7 740 aaPredicted RBP12.73□□□□□ -0.37
SERBP1-203ENST00000370994 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
SERBP1-203ENST00000370994 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
SERBP1-203ENST00000370994 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
SERBP1-203ENST00000370994 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
SERBP1-203ENST00000370994 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
SERBP1-203ENST00000370994 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
SERBP1-203ENST00000370994 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.4
SERBP1-203ENST00000370994 A0A0G2JS52 829 aa12.51□□□□□ -0.41
SERBP1-203ENST00000370994 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
SERBP1-203ENST00000370994 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
SERBP1-203ENST00000370994 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
SERBP1-203ENST00000370994 HRCP23327 699 aa12.42□□□□□ -0.42
SERBP1-203ENST00000370994 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
SERBP1-203ENST00000370994 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
SERBP1-203ENST00000370994 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
SERBP1-203ENST00000370994 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
SERBP1-203ENST00000370994 ARXQ96QS3 562 aa12.37□□□□□ -0.43
SERBP1-203ENST00000370994 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
SERBP1-203ENST00000370994 ABCC9O60706 1549 aa12.36□□□□□ -0.43
SERBP1-203ENST00000370994 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
SERBP1-203ENST00000370994 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
SERBP1-203ENST00000370994 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
SERBP1-203ENST00000370994 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
SERBP1-203ENST00000370994 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
SERBP1-203ENST00000370994 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
SERBP1-203ENST00000370994 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
SERBP1-203ENST00000370994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.469e-10■■■■□ 22.7
SERBP1-203ENST00000370994 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
SERBP1-203ENST00000370994 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
SERBP1-203ENST00000370994 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
SERBP1-203ENST00000370994 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
SERBP1-203ENST00000370994 GTF3C3Q9Y5Q9 886 aa12.16□□□□□ -0.46
SERBP1-203ENST00000370994 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
SERBP1-203ENST00000370994 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
SERBP1-203ENST00000370994 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
SERBP1-203ENST00000370994 CHIC2Q9UKJ5 165 aa12.09□□□□□ -0.47
SERBP1-203ENST00000370994 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
SERBP1-203ENST00000370994 NBR1Q14596 966 aa12.05□□□□□ -0.48
SERBP1-203ENST00000370994 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
SERBP1-203ENST00000370994 ANP32CO43423 234 aa12.05□□□□□ -0.48
SERBP1-203ENST00000370994 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
SERBP1-203ENST00000370994 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
SERBP1-203ENST00000370994 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
SERBP1-203ENST00000370994 NEFMP07197 916 aa11.94□□□□□ -0.5
SERBP1-203ENST00000370994 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
SERBP1-203ENST00000370994 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
SERBP1-203ENST00000370994 FKBP8Q14318 412 aa11.92□□□□□ -0.5
SERBP1-203ENST00000370994 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
SERBP1-203ENST00000370994 PPM1GO15355 546 aaPredicted RBP11.89□□□□□ -0.51
SERBP1-203ENST00000370994 ARID4BQ4LE39 1312 aaPredicted RBP11.89□□□□□ -0.51
SERBP1-203ENST00000370994 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
SERBP1-203ENST00000370994 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
SERBP1-203ENST00000370994 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
SERBP1-203ENST00000370994 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
SERBP1-203ENST00000370994 SOX12O15370 315 aa11.87□□□□□ -0.51
SERBP1-203ENST00000370994 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
SERBP1-203ENST00000370994 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
SERBP1-203ENST00000370994 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
SERBP1-203ENST00000370994 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
SERBP1-203ENST00000370994 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms