Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.71□□□□□ -1.52e-6■■■■□ 24.4
RPS3P23396 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.42□□□□□ -1.542e-6■■■■□ 24.4
RPS3P23396 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.89□□□□□ -1.632e-6■■■■□ 24.4
RPS3P23396 MATR3-218ENST00000511978 573 ntTSL 34.85□□□□□ -1.632e-6■■■■□ 24.4
RPS3P23396 MATR3-214ENST00000509918 377 ntTSL 44.74□□□□□ -1.652e-6■■■■□ 24.4
RPS3P23396 MATR3-216ENST00000511249 447 ntTSL 43.61□□□□□ -1.832e-6■■■■□ 24.4
RPS3P23396 CHURC1-FNTB-202ENST00000551823 517 ntTSL 22.47□□□□□ -2.013e-9■■■■□ 24.4
RPS3P23396 DDOST-203ENST00000464364 502 ntTSL 513.85□□□□□ -0.193e-13■■■■□ 24.4
RPS3P23396 ANAPC11-220ENST00000584197 386 ntTSL 525.31■■□□□ 1.641e-7■■■■□ 24.4
RPS3P23396 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.011e-7■■■■□ 24.4
RPS3P23396 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.037e-7■■■■□ 24.4
RPS3P23396 EIF3K-210ENST00000591409 583 ntTSL 312.86□□□□□ -0.357e-7■■■■□ 24.4
RPS3P23396 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.64□□□□□ -0.397e-7■■■■□ 24.4
RPS3P23396 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC11.49□□□□□ -0.577e-7■■■■□ 24.4
RPS3P23396 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC10.46□□□□□ -0.737e-7■■■■□ 24.4
RPS3P23396 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC9.75□□□□□ -0.857e-7■■■■□ 24.4
RPS3P23396 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.927e-7■■■■□ 24.4
RPS3P23396 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC9.13□□□□□ -0.957e-7■■■■□ 24.4
RPS3P23396 BSG-209ENST00000574970 570 ntTSL 420.66■□□□□ 0.99e-33■■■■□ 24.4
RPS3P23396 TCP1-211ENST00000539756 780 ntTSL 314.95□□□□□ -0.022e-8■■■■□ 24.4
RPS3P23396 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.114e-8■■■■□ 24.4
RPS3P23396 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.74e-7■■■■□ 24.4
RPS3P23396 SELENOP-205ENST00000508937 606 ntTSL 27.57□□□□□ -1.28e-27■■■■□ 24.4
RPS3P23396 VCP-204ENST00000466100 508 ntTSL 211.02□□□□□ -0.652e-7■■■■□ 24.4
RPS3P23396 GALNT2-202ENST00000485438 4030 ntTSL 510.72□□□□□ -0.695e-8■■■■□ 24.4
RPS3P23396 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.216e-7■■■■□ 24.4
RPS3P23396 DDOST-205ENST00000477229 766 ntTSL 216.96■□□□□ 0.311e-17■■■■□ 24.4
RPS3P23396 CTSH-209ENST00000529612 574 ntTSL 411.8□□□□□ -0.522e-8■■■■□ 24.4
RPS3P23396 CTSH-208ENST00000529263 770 ntTSL 511.34□□□□□ -0.592e-8■■■■□ 24.4
RPS3P23396 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.282e-7■■■■□ 24.3
RPS3P23396 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.055e-8■■■■□ 24.3
RPS3P23396 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.055e-8■■■■□ 24.3
RPS3P23396 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.72□□□□□ -0.055e-8■■■■□ 24.3
RPS3P23396 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.651e-6■■■■□ 24.3
RPS3P23396 HFM1-204ENST00000448819 540 ntTSL 58.91□□□□□ -0.988e-15■■■■□ 24.3
RPS3P23396 HFM1-208ENST00000488023 1699 ntTSL 52.12□□□□□ -2.078e-15■■■■□ 24.3
RPS3P23396 HFM1-207ENST00000481900 2020 ntTSL 51.52□□□□□ -2.178e-15■■■■□ 24.3
RPS3P23396 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.258e-15■■■■□ 24.3
RPS3P23396 HFM1-202ENST00000427444 672 ntTSL 5-0.36□□□□□ -2.478e-15■■■■□ 24.3
RPS3P23396 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.5□□□□□ -0.418e-11■■■■□ 24.3
RPS3P23396 HSPA8-215ENST00000532091 2301 ntTSL 510.93□□□□□ -0.668e-11■■■■□ 24.3
RPS3P23396 TKFC-208ENST00000529092 332 ntTSL 316.47■□□□□ 0.231e-20■■■■□ 24.3
RPS3P23396 C2-203ENST00000411571 773 ntTSL 512.95□□□□□ -0.343e-7■■■■□ 24.3
RPS3P23396 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.099e-7■■■■□ 24.3
RPS3P23396 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.2□□□□□ -0.469e-7■■■■□ 24.3
RPS3P23396 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC10.22□□□□□ -0.779e-7■■■■□ 24.3
RPS3P23396 UROD-214ENST00000478467 857 ntTSL 312.54□□□□□ -0.46e-10■■■■□ 24.3
RPS3P23396 UROD-215ENST00000486699 968 ntTSL 311.2□□□□□ -0.626e-10■■■■□ 24.3
RPS3P23396 UROD-211ENST00000469548 1044 ntTSL 211.2□□□□□ -0.626e-10■■■■□ 24.3
RPS3P23396 UROD-202ENST00000428106 682 ntTSL 39.96□□□□□ -0.826e-10■■■■□ 24.3
RPS3P23396 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.02■□□□□ -02e-7■■■■□ 24.3
RPS3P23396 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.062e-7■■■■□ 24.3
RPS3P23396 MCM2-208ENST00000480910 693 ntTSL 222.42■■□□□ 1.185e-8■■■■□ 24.3
RPS3P23396 MCM2-204ENST00000472731 547 ntTSL 213.74□□□□□ -0.215e-8■■■■□ 24.3
RPS3P23396 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.54■□□□□ 0.45e-8■■■■□ 24.3
RPS3P23396 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.23□□□□□ -0.455e-8■■■■□ 24.3
RPS3P23396 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.535e-8■■■■□ 24.3
RPS3P23396 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC10.77□□□□□ -0.685e-8■■■■□ 24.3
RPS3P23396 HADHB-207ENST00000494615 2883 ntTSL 27.42□□□□□ -1.225e-8■■■■□ 24.3
RPS3P23396 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.453e-6■■■■□ 24.3
RPS3P23396 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.16e-10■■■■□ 24.3
RPS3P23396 UROD-219ENST00000494399 1848 ntTSL 213.82□□□□□ -0.26e-10■■■■□ 24.3
RPS3P23396 UROD-222ENST00000636836 1173 ntTSL 5 BASIC11.03□□□□□ -0.646e-10■■■■□ 24.3
RPS3P23396 UROD-221ENST00000636293 1102 ntTSL 5 BASIC11.03□□□□□ -0.646e-10■■■■□ 24.3
RPS3P23396 LDHB-209ENST00000542765 672 ntTSL 21.97□□□□□ -2.092e-9■■■■□ 24.3
RPS3P23396 CCT2-211ENST00000550653 567 ntTSL 24.92□□□□□ -1.628e-15■■■■□ 24.3
RPS3P23396 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.888e-15■■■■□ 24.3
RPS3P23396 GYPE-203ENST00000506264 1624 ntTSL 53.15□□□□□ -1.918e-15■■■■□ 24.3
RPS3P23396 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.938e-15■■■■□ 24.3
RPS3P23396 ABHD14A-ACY1-204ENST00000497128 914 ntTSL 220.33■□□□□ 0.858e-11■■■■□ 24.3
RPS3P23396 DLK1-203ENST00000392848 555 ntTSL 415.25■□□□□ 0.039e-13■■■■□ 24.3
RPS3P23396 HSD17B12-208ENST00000533090 2507 ntTSL 23.6□□□□□ -1.831e-6■■■■□ 24.2
RPS3P23396 POR-224ENST00000496888 939 ntTSL 216.51■□□□□ 0.232e-22■■■■□ 24.2
RPS3P23396 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.056e-8■■■■□ 24.2
RPS3P23396 HYOU1-207ENST00000530473 2023 ntTSL 513.64□□□□□ -0.231e-7■■■■□ 24.2
RPS3P23396 NARS-202ENST00000411676 1097 ntTSL 212.72□□□□□ -0.371e-6■■■■□ 24.2
RPS3P23396 CTSH-210ENST00000529861 857 ntTSL 317.3■□□□□ 0.362e-8■■■■□ 24.2
RPS3P23396 CTSH-207ENST00000528741 719 ntTSL 511.8□□□□□ -0.522e-8■■■■□ 24.2
RPS3P23396 PSMA1-203ENST00000524606 646 ntTSL 20.19□□□□□ -2.385e-9■■■■□ 24.2
RPS3P23396 SELENOF-204ENST00000467557 499 ntTSL 57.55□□□□□ -1.21e-10■■■■□ 24.2
RPS3P23396 AKR1A1-206ENST00000475919 630 ntTSL 210.26□□□□□ -0.775e-7■■■■□ 24.2
RPS3P23396 AKR1A1-210ENST00000487654 552 ntTSL 25.86□□□□□ -1.475e-7■■■■□ 24.2
RPS3P23396 LGALS3BP-203ENST00000586300 442 ntTSL 212.93□□□□□ -0.347e-25■■■■□ 24.2
RPS3P23396 SDHA-217ENST00000514233 558 ntTSL 48.55□□□□□ -1.045e-7■■■■□ 24.2
RPS3P23396 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.61■□□□□ 0.736e-7■■■■□ 24.2
RPS3P23396 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.736e-7■■■■□ 24.2
RPS3P23396 RUVBL2-204ENST00000594338 1853 ntTSL 519.07■□□□□ 0.646e-7■■■■□ 24.2
RPS3P23396 RUVBL2-208ENST00000596247 1563 ntTSL 218.53■□□□□ 0.566e-7■■■■□ 24.2
RPS3P23396 RUVBL2-201ENST00000221413 1478 ntTSL 1 (best)16.86■□□□□ 0.296e-7■■■■□ 24.2
RPS3P23396 GHDC-209ENST00000588762 842 ntTSL 1 (best)15.24■□□□□ 0.039e-7■■■■□ 24.2
RPS3P23396 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.47e-7■■■■□ 24.2
RPS3P23396 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.657e-7■■■■□ 24.2
RPS3P23396 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.64e-49■■■■□ 24.2
RPS3P23396 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.682e-7■■■■□ 24.2
RPS3P23396 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.382e-7■■■■□ 24.2
RPS3P23396 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.382e-7■■■■□ 24.2
RPS3P23396 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.382e-7■■■■□ 24.2
RPS3P23396 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.82e-7■■■■□ 24.2
RPS3P23396 ALDOA-205ENST00000562168 666 ntTSL 310.45□□□□□ -0.741e-60■■■■□ 24.2
RPS3P23396 BLVRB-204ENST00000601346 676 ntTSL 212.02□□□□□ -0.493e-27■■■■□ 24.2
Retrieved 100 of 24,271 protein–RNA pairs in 133 ms