RNA–Protein interactions for RNA: ENST00000529092.1

TKFC-208, Transcript of triokinase and FMN cyclase, humanhuman

TSL 3

Gene TKFC, Length 332 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-208ENST00000529092 NISCHQ9Y2I1 1504 aa40.71■■■■■ 4.11
TKFC-208ENST00000529092 CCDC180Q9P1Z9 1646 aa36.18■■■■□ 3.38
TKFC-208ENST00000529092 ABCC9O60706 1549 aa35.22■■■■□ 3.23
TKFC-208ENST00000529092 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
TKFC-208ENST00000529092 NACADO15069 1562 aa33.97■■■■□ 3.03
TKFC-208ENST00000529092 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
TKFC-208ENST00000529092 DCAF8L2P0C7V8 631 aa33.87■■■■□ 3.01
TKFC-208ENST00000529092 MYO15BQ96JP2 1530 aa33.82■■■■□ 3
TKFC-208ENST00000529092 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
TKFC-208ENST00000529092 UNC13AQ9UPW8 1703 aa33.18■■■□□ 2.9
TKFC-208ENST00000529092 SCRIBQ14160 1630 aa32.98■■■□□ 2.87
TKFC-208ENST00000529092 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
TKFC-208ENST00000529092 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
TKFC-208ENST00000529092 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
TKFC-208ENST00000529092 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
TKFC-208ENST00000529092 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
TKFC-208ENST00000529092 CC2D2AQ9P2K1 1620 aa31.88■■■□□ 2.69
TKFC-208ENST00000529092 CECR2Q9BXF3 1484 aa31.66■■■□□ 2.66
TKFC-208ENST00000529092 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
TKFC-208ENST00000529092 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
TKFC-208ENST00000529092 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
TKFC-208ENST00000529092 SMARCA2P51531 1590 aa31.35■■■□□ 2.61
TKFC-208ENST00000529092 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
TKFC-208ENST00000529092 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
TKFC-208ENST00000529092 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
TKFC-208ENST00000529092 HMGXB3Q12766 1538 aa31.21■■■□□ 2.59
TKFC-208ENST00000529092 BAZ1BQ9UIG0 1483 aaKnown RBP31.11■■■□□ 2.57
TKFC-208ENST00000529092 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
TKFC-208ENST00000529092 WIZO95785 1651 aa31.03■■■□□ 2.56
TKFC-208ENST00000529092 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
TKFC-208ENST00000529092 NESP48681 1621 aa30.51■■■□□ 2.47
TKFC-208ENST00000529092 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
TKFC-208ENST00000529092 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
TKFC-208ENST00000529092 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
TKFC-208ENST00000529092 CCDC88BA6NC98 1476 aa30.33■■■□□ 2.45
TKFC-208ENST00000529092 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
TKFC-208ENST00000529092 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
TKFC-208ENST00000529092 CFTRP13569 1480 aa30.26■■■□□ 2.44
TKFC-208ENST00000529092 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
TKFC-208ENST00000529092 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
TKFC-208ENST00000529092 THOC2Q8NI27 1593 aaKnown RBP30.07■■■□□ 2.4
TKFC-208ENST00000529092 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
TKFC-208ENST00000529092 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
TKFC-208ENST00000529092 CUX2O14529 1486 aa30.02■■■□□ 2.4
TKFC-208ENST00000529092 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
TKFC-208ENST00000529092 WDR62O43379 1518 aa29.86■■■□□ 2.37
TKFC-208ENST00000529092 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
TKFC-208ENST00000529092 ABCC8Q09428 1581 aa29.63■■■□□ 2.33
TKFC-208ENST00000529092 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
TKFC-208ENST00000529092 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
TKFC-208ENST00000529092 CUX1P39880 1505 aa29.42■■■□□ 2.3
TKFC-208ENST00000529092 IFT140Q96RY7 1462 aa29.39■■■□□ 2.3
TKFC-208ENST00000529092 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
TKFC-208ENST00000529092 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
TKFC-208ENST00000529092 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
TKFC-208ENST00000529092 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
TKFC-208ENST00000529092 SOGA1O94964 1423 aa29.22■■■□□ 2.27
TKFC-208ENST00000529092 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
TKFC-208ENST00000529092 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
TKFC-208ENST00000529092 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
TKFC-208ENST00000529092 RAD54L2Q9Y4B4 1467 aa29.2■■■□□ 2.26
TKFC-208ENST00000529092 SYNJ1O43426 1573 aa29.2■■■□□ 2.26
TKFC-208ENST00000529092 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
TKFC-208ENST00000529092 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
TKFC-208ENST00000529092 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.243e-9■■■■■ 45.4
TKFC-208ENST00000529092 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
TKFC-208ENST00000529092 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
TKFC-208ENST00000529092 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
TKFC-208ENST00000529092 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
TKFC-208ENST00000529092 DNAJC5Q9H3Z4 198 aa28.89■■■□□ 2.22
TKFC-208ENST00000529092 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
TKFC-208ENST00000529092 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
TKFC-208ENST00000529092 SNAPC4Q5SXM2 1469 aa28.83■■■□□ 2.21
TKFC-208ENST00000529092 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
TKFC-208ENST00000529092 CHD1O14646 1710 aa28.74■■■□□ 2.19
TKFC-208ENST00000529092 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
TKFC-208ENST00000529092 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
TKFC-208ENST00000529092 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
TKFC-208ENST00000529092 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
TKFC-208ENST00000529092 FBLN2P98095 1184 aa28.66■■■□□ 2.18
TKFC-208ENST00000529092 ADAMTS12P58397 1594 aa28.64■■■□□ 2.18
TKFC-208ENST00000529092 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
TKFC-208ENST00000529092 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
TKFC-208ENST00000529092 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
TKFC-208ENST00000529092 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
TKFC-208ENST00000529092 IGF1RP08069 1367 aa28.5■■■□□ 2.15
TKFC-208ENST00000529092 CUL7Q14999 1698 aa28.48■■■□□ 2.15
TKFC-208ENST00000529092 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
TKFC-208ENST00000529092 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
TKFC-208ENST00000529092 NUP160Q12769 1436 aa28.39■■■□□ 2.14
TKFC-208ENST00000529092 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
TKFC-208ENST00000529092 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
TKFC-208ENST00000529092 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
TKFC-208ENST00000529092 ARHGEF11O15085 1522 aa28.32■■■□□ 2.12
TKFC-208ENST00000529092 RIMBP3CA6NJZ7 1639 aa28.3■■■□□ 2.12
TKFC-208ENST00000529092 RIMBP3BA6NNM3 1639 aa28.3■■■□□ 2.12
TKFC-208ENST00000529092 RIMBP3Q9UFD9 1639 aa28.3■■■□□ 2.12
TKFC-208ENST00000529092 EEA1Q15075 1411 aa28.22■■■□□ 2.11
TKFC-208ENST00000529092 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
TKFC-208ENST00000529092 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms