RNA–Protein interactions for RNA: ENST00000506264.5

GYPE-203, Transcript of glycophorin E (MNS blood group), humanhuman

TSL 5

Gene GYPE, Length 1,624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPE-203ENST00000506264 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
GYPE-203ENST00000506264 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
GYPE-203ENST00000506264 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
GYPE-203ENST00000506264 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
GYPE-203ENST00000506264 FOXD1Q16676 465 aa17.71■□□□□ 0.43
GYPE-203ENST00000506264 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
GYPE-203ENST00000506264 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
GYPE-203ENST00000506264 ADRA2BP18089 450 aa16.68■□□□□ 0.26
GYPE-203ENST00000506264 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
GYPE-203ENST00000506264 MSH5O43196 834 aa16.45■□□□□ 0.22
GYPE-203ENST00000506264 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
GYPE-203ENST00000506264 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
GYPE-203ENST00000506264 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.02
GYPE-203ENST00000506264 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
GYPE-203ENST00000506264 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
GYPE-203ENST00000506264 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
GYPE-203ENST00000506264 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
GYPE-203ENST00000506264 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
GYPE-203ENST00000506264 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.08
GYPE-203ENST00000506264 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
GYPE-203ENST00000506264 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
GYPE-203ENST00000506264 KCNA4P22459 653 aa14.26□□□□□ -0.13
GYPE-203ENST00000506264 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
GYPE-203ENST00000506264 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
GYPE-203ENST00000506264 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
GYPE-203ENST00000506264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
GYPE-203ENST00000506264 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
GYPE-203ENST00000506264 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
GYPE-203ENST00000506264 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
GYPE-203ENST00000506264 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
GYPE-203ENST00000506264 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
GYPE-203ENST00000506264 CAPN15O75808 1086 aa13.38□□□□□ -0.27
GYPE-203ENST00000506264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
GYPE-203ENST00000506264 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
GYPE-203ENST00000506264 DSG3P32926 999 aa13.26□□□□□ -0.29
GYPE-203ENST00000506264 APLP2Q06481 763 aa13.24□□□□□ -0.29
GYPE-203ENST00000506264 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
GYPE-203ENST00000506264 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
GYPE-203ENST00000506264 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
GYPE-203ENST00000506264 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
GYPE-203ENST00000506264 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
GYPE-203ENST00000506264 ZBTB22O15209 634 aa13.12□□□□□ -0.31
GYPE-203ENST00000506264 ABCB7O75027 752 aa13.1□□□□□ -0.31
GYPE-203ENST00000506264 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
GYPE-203ENST00000506264 POLA2Q14181 598 aa12.91□□□□□ -0.34
GYPE-203ENST00000506264 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
GYPE-203ENST00000506264 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
GYPE-203ENST00000506264 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
GYPE-203ENST00000506264 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
GYPE-203ENST00000506264 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
GYPE-203ENST00000506264 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
GYPE-203ENST00000506264 FBLN2P98095 1184 aa12.4□□□□□ -0.42
GYPE-203ENST00000506264 POTEHQ6S545 545 aa12.39□□□□□ -0.43
GYPE-203ENST00000506264 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
GYPE-203ENST00000506264 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
GYPE-203ENST00000506264 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
GYPE-203ENST00000506264 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
GYPE-203ENST00000506264 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
GYPE-203ENST00000506264 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
GYPE-203ENST00000506264 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
GYPE-203ENST00000506264 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
GYPE-203ENST00000506264 PITPNM1O00562 1244 aa12.15□□□□□ -0.47
GYPE-203ENST00000506264 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
GYPE-203ENST00000506264 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
GYPE-203ENST00000506264 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
GYPE-203ENST00000506264 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
GYPE-203ENST00000506264 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
GYPE-203ENST00000506264 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
GYPE-203ENST00000506264 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
GYPE-203ENST00000506264 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
GYPE-203ENST00000506264 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
GYPE-203ENST00000506264 HAX1O00165 279 aa11.78□□□□□ -0.52
GYPE-203ENST00000506264 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
GYPE-203ENST00000506264 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
GYPE-203ENST00000506264 EVX2Q03828 476 aa11.68□□□□□ -0.54
GYPE-203ENST00000506264 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
GYPE-203ENST00000506264 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
GYPE-203ENST00000506264 PROM2Q8N271 834 aa11.6□□□□□ -0.55
GYPE-203ENST00000506264 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
GYPE-203ENST00000506264 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
GYPE-203ENST00000506264 FKBP8Q14318 412 aa11.49□□□□□ -0.57
GYPE-203ENST00000506264 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
GYPE-203ENST00000506264 GABBR2O75899 941 aa11.4□□□□□ -0.58
GYPE-203ENST00000506264 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
GYPE-203ENST00000506264 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
GYPE-203ENST00000506264 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
GYPE-203ENST00000506264 MIER1Q8N108 512 aa11.31□□□□□ -0.6
GYPE-203ENST00000506264 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
GYPE-203ENST00000506264 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
GYPE-203ENST00000506264 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
GYPE-203ENST00000506264 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
GYPE-203ENST00000506264 CLCN6P51797 869 aa11.23□□□□□ -0.61
GYPE-203ENST00000506264 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
GYPE-203ENST00000506264 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
GYPE-203ENST00000506264 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
GYPE-203ENST00000506264 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
GYPE-203ENST00000506264 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
GYPE-203ENST00000506264 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
GYPE-203ENST00000506264 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
GYPE-203ENST00000506264 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms