RNA–Protein interactions for RNA: ENST00000592558.1

EIF3K-211, Transcript of eukaryotic translation initiation factor 3 subunit K, humanhuman

TSL 2 BASIC

Gene EIF3K, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3K-211ENST00000592558 NISCHQ9Y2I1 1504 aa23.66■■□□□ 1.38
EIF3K-211ENST00000592558 ABCC9O60706 1549 aa21.29■■□□□ 1
EIF3K-211ENST00000592558 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
EIF3K-211ENST00000592558 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
EIF3K-211ENST00000592558 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
EIF3K-211ENST00000592558 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
EIF3K-211ENST00000592558 NACADO15069 1562 aa20■□□□□ 0.79
EIF3K-211ENST00000592558 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
EIF3K-211ENST00000592558 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
EIF3K-211ENST00000592558 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
EIF3K-211ENST00000592558 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
EIF3K-211ENST00000592558 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
EIF3K-211ENST00000592558 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
EIF3K-211ENST00000592558 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
EIF3K-211ENST00000592558 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
EIF3K-211ENST00000592558 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
EIF3K-211ENST00000592558 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
EIF3K-211ENST00000592558 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
EIF3K-211ENST00000592558 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
EIF3K-211ENST00000592558 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
EIF3K-211ENST00000592558 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
EIF3K-211ENST00000592558 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
EIF3K-211ENST00000592558 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
EIF3K-211ENST00000592558 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
EIF3K-211ENST00000592558 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
EIF3K-211ENST00000592558 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
EIF3K-211ENST00000592558 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
EIF3K-211ENST00000592558 NESP48681 1621 aa18.3■□□□□ 0.52
EIF3K-211ENST00000592558 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
EIF3K-211ENST00000592558 CUX2O14529 1486 aa18.2■□□□□ 0.5
EIF3K-211ENST00000592558 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
EIF3K-211ENST00000592558 WIZO95785 1651 aa18.06■□□□□ 0.48
EIF3K-211ENST00000592558 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
EIF3K-211ENST00000592558 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
EIF3K-211ENST00000592558 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
EIF3K-211ENST00000592558 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
EIF3K-211ENST00000592558 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
EIF3K-211ENST00000592558 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
EIF3K-211ENST00000592558 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
EIF3K-211ENST00000592558 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
EIF3K-211ENST00000592558 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
EIF3K-211ENST00000592558 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.43
EIF3K-211ENST00000592558 CFTRP13569 1480 aa17.75■□□□□ 0.43
EIF3K-211ENST00000592558 WDR62O43379 1518 aa17.73■□□□□ 0.43
EIF3K-211ENST00000592558 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
EIF3K-211ENST00000592558 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
EIF3K-211ENST00000592558 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
EIF3K-211ENST00000592558 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
EIF3K-211ENST00000592558 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
EIF3K-211ENST00000592558 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
EIF3K-211ENST00000592558 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
EIF3K-211ENST00000592558 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
EIF3K-211ENST00000592558 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
EIF3K-211ENST00000592558 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
EIF3K-211ENST00000592558 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.375e-7■■■■□ 25.8
EIF3K-211ENST00000592558 FBLN2P98095 1184 aa17.33■□□□□ 0.36
EIF3K-211ENST00000592558 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
EIF3K-211ENST00000592558 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
EIF3K-211ENST00000592558 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
EIF3K-211ENST00000592558 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
EIF3K-211ENST00000592558 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
EIF3K-211ENST00000592558 SOGA1O94964 1423 aa17.25■□□□□ 0.35
EIF3K-211ENST00000592558 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
EIF3K-211ENST00000592558 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
EIF3K-211ENST00000592558 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
EIF3K-211ENST00000592558 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
EIF3K-211ENST00000592558 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
EIF3K-211ENST00000592558 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
EIF3K-211ENST00000592558 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
EIF3K-211ENST00000592558 CUX1P39880 1505 aa17.15■□□□□ 0.34
EIF3K-211ENST00000592558 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
EIF3K-211ENST00000592558 CHD1O14646 1710 aa17.13■□□□□ 0.33
EIF3K-211ENST00000592558 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
EIF3K-211ENST00000592558 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
EIF3K-211ENST00000592558 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
EIF3K-211ENST00000592558 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
EIF3K-211ENST00000592558 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
EIF3K-211ENST00000592558 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
EIF3K-211ENST00000592558 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
EIF3K-211ENST00000592558 WDR97A6NE52 1622 aa16.96■□□□□ 0.3
EIF3K-211ENST00000592558 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
EIF3K-211ENST00000592558 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
EIF3K-211ENST00000592558 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
EIF3K-211ENST00000592558 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
EIF3K-211ENST00000592558 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
EIF3K-211ENST00000592558 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
EIF3K-211ENST00000592558 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
EIF3K-211ENST00000592558 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
EIF3K-211ENST00000592558 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
EIF3K-211ENST00000592558 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
EIF3K-211ENST00000592558 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
EIF3K-211ENST00000592558 ERCC6L2Q5T890 1561 aa16.75■□□□□ 0.27
EIF3K-211ENST00000592558 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
EIF3K-211ENST00000592558 NUP160Q12769 1436 aa16.72■□□□□ 0.27
EIF3K-211ENST00000592558 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
EIF3K-211ENST00000592558 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
EIF3K-211ENST00000592558 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
EIF3K-211ENST00000592558 IGF1RP08069 1367 aa16.62■□□□□ 0.25
EIF3K-211ENST00000592558 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
EIF3K-211ENST00000592558 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms