RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
LDHB-209ENST00000542765 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
LDHB-209ENST00000542765 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
LDHB-209ENST00000542765 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
LDHB-209ENST00000542765 FOXD1Q16676 465 aa16.75■□□□□ 0.27
LDHB-209ENST00000542765 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
LDHB-209ENST00000542765 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
LDHB-209ENST00000542765 ADRA2BP18089 450 aa15.83■□□□□ 0.12
LDHB-209ENST00000542765 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
LDHB-209ENST00000542765 MSH5O43196 834 aa15.51■□□□□ 0.07
LDHB-209ENST00000542765 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
LDHB-209ENST00000542765 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
LDHB-209ENST00000542765 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
LDHB-209ENST00000542765 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
LDHB-209ENST00000542765 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
LDHB-209ENST00000542765 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
LDHB-209ENST00000542765 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
LDHB-209ENST00000542765 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
LDHB-209ENST00000542765 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
LDHB-209ENST00000542765 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
LDHB-209ENST00000542765 KCNA4P22459 653 aa13.75□□□□□ -0.21
LDHB-209ENST00000542765 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
LDHB-209ENST00000542765 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
LDHB-209ENST00000542765 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
LDHB-209ENST00000542765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.35e-11■■□□□ 13.9
LDHB-209ENST00000542765 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
LDHB-209ENST00000542765 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
LDHB-209ENST00000542765 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
LDHB-209ENST00000542765 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
LDHB-209ENST00000542765 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
LDHB-209ENST00000542765 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
LDHB-209ENST00000542765 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
LDHB-209ENST00000542765 ZBTB22O15209 634 aa12.7□□□□□ -0.38
LDHB-209ENST00000542765 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
LDHB-209ENST00000542765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
LDHB-209ENST00000542765 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
LDHB-209ENST00000542765 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
LDHB-209ENST00000542765 CAPN15O75808 1086 aa12.59□□□□□ -0.39
LDHB-209ENST00000542765 APLP2Q06481 763 aa12.58□□□□□ -0.4
LDHB-209ENST00000542765 DSG3P32926 999 aa12.56□□□□□ -0.4
LDHB-209ENST00000542765 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
LDHB-209ENST00000542765 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
LDHB-209ENST00000542765 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
LDHB-209ENST00000542765 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
LDHB-209ENST00000542765 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
LDHB-209ENST00000542765 ABCB7O75027 752 aa12.34□□□□□ -0.43
LDHB-209ENST00000542765 POLA2Q14181 598 aa12.25□□□□□ -0.45
LDHB-209ENST00000542765 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
LDHB-209ENST00000542765 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
LDHB-209ENST00000542765 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
LDHB-209ENST00000542765 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
LDHB-209ENST00000542765 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
LDHB-209ENST00000542765 FBLN2P98095 1184 aa11.8□□□□□ -0.52
LDHB-209ENST00000542765 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
LDHB-209ENST00000542765 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
LDHB-209ENST00000542765 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
LDHB-209ENST00000542765 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
LDHB-209ENST00000542765 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
LDHB-209ENST00000542765 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
LDHB-209ENST00000542765 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
LDHB-209ENST00000542765 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
LDHB-209ENST00000542765 POTEHQ6S545 545 aa11.52□□□□□ -0.57
LDHB-209ENST00000542765 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
LDHB-209ENST00000542765 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
LDHB-209ENST00000542765 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
LDHB-209ENST00000542765 SPDYE1Q8NFV5 336 aaPredicted RBP11.39□□□□□ -0.59
LDHB-209ENST00000542765 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
LDHB-209ENST00000542765 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
LDHB-209ENST00000542765 PROM2Q8N271 834 aa11.3□□□□□ -0.6
LDHB-209ENST00000542765 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
LDHB-209ENST00000542765 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
LDHB-209ENST00000542765 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
LDHB-209ENST00000542765 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
LDHB-209ENST00000542765 FKBP8Q14318 412 aa11.1□□□□□ -0.63
LDHB-209ENST00000542765 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
LDHB-209ENST00000542765 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
LDHB-209ENST00000542765 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
LDHB-209ENST00000542765 EVX2Q03828 476 aa11□□□□□ -0.65
LDHB-209ENST00000542765 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
LDHB-209ENST00000542765 HAX1O00165 279 aa10.99□□□□□ -0.65
LDHB-209ENST00000542765 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
LDHB-209ENST00000542765 SP7Q8TDD2 431 aaPredicted RBP10.94□□□□□ -0.66
LDHB-209ENST00000542765 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
LDHB-209ENST00000542765 MIER1Q8N108 512 aa10.79□□□□□ -0.68
LDHB-209ENST00000542765 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
LDHB-209ENST00000542765 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
LDHB-209ENST00000542765 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
LDHB-209ENST00000542765 GABBR2O75899 941 aa10.72□□□□□ -0.69
LDHB-209ENST00000542765 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
LDHB-209ENST00000542765 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
LDHB-209ENST00000542765 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
LDHB-209ENST00000542765 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
LDHB-209ENST00000542765 CLCN6P51797 869 aa10.67□□□□□ -0.7
LDHB-209ENST00000542765 NUBP1P53384 320 aa10.66□□□□□ -0.7
LDHB-209ENST00000542765 RASEFQ8IZ41 740 aa10.64□□□□□ -0.71
LDHB-209ENST00000542765 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
LDHB-209ENST00000542765 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
LDHB-209ENST00000542765 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
LDHB-209ENST00000542765 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
LDHB-209ENST00000542765 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms