RNA–Protein interactions for RNA: ENST00000467557.1

SELENOF-204, Transcript of selenoprotein F, humanhuman

TSL 5

Gene SELENOF, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-204ENST00000467557 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
SELENOF-204ENST00000467557 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
SELENOF-204ENST00000467557 ABCC9O60706 1549 aa15.95■□□□□ 0.14
SELENOF-204ENST00000467557 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
SELENOF-204ENST00000467557 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
SELENOF-204ENST00000467557 NACADO15069 1562 aa15.36■□□□□ 0.05
SELENOF-204ENST00000467557 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
SELENOF-204ENST00000467557 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
SELENOF-204ENST00000467557 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
SELENOF-204ENST00000467557 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
SELENOF-204ENST00000467557 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
SELENOF-204ENST00000467557 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
SELENOF-204ENST00000467557 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
SELENOF-204ENST00000467557 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
SELENOF-204ENST00000467557 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
SELENOF-204ENST00000467557 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
SELENOF-204ENST00000467557 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
SELENOF-204ENST00000467557 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
SELENOF-204ENST00000467557 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
SELENOF-204ENST00000467557 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
SELENOF-204ENST00000467557 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
SELENOF-204ENST00000467557 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.12
SELENOF-204ENST00000467557 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
SELENOF-204ENST00000467557 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
SELENOF-204ENST00000467557 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
SELENOF-204ENST00000467557 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
SELENOF-204ENST00000467557 WIZO95785 1651 aa14.17□□□□□ -0.14
SELENOF-204ENST00000467557 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
SELENOF-204ENST00000467557 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
SELENOF-204ENST00000467557 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
SELENOF-204ENST00000467557 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
SELENOF-204ENST00000467557 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
SELENOF-204ENST00000467557 NESP48681 1621 aa13.89□□□□□ -0.19
SELENOF-204ENST00000467557 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.2
SELENOF-204ENST00000467557 CFTRP13569 1480 aa13.78□□□□□ -0.2
SELENOF-204ENST00000467557 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
SELENOF-204ENST00000467557 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
SELENOF-204ENST00000467557 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
SELENOF-204ENST00000467557 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
SELENOF-204ENST00000467557 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
SELENOF-204ENST00000467557 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
SELENOF-204ENST00000467557 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
SELENOF-204ENST00000467557 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
SELENOF-204ENST00000467557 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
SELENOF-204ENST00000467557 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
SELENOF-204ENST00000467557 WDR62O43379 1518 aa13.5□□□□□ -0.25
SELENOF-204ENST00000467557 CUX2O14529 1486 aa13.47□□□□□ -0.25
SELENOF-204ENST00000467557 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
SELENOF-204ENST00000467557 CUX1P39880 1505 aa13.44□□□□□ -0.26
SELENOF-204ENST00000467557 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
SELENOF-204ENST00000467557 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
SELENOF-204ENST00000467557 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SELENOF-204ENST00000467557 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
SELENOF-204ENST00000467557 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
SELENOF-204ENST00000467557 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
SELENOF-204ENST00000467557 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
SELENOF-204ENST00000467557 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
SELENOF-204ENST00000467557 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
SELENOF-204ENST00000467557 SOGA1O94964 1423 aa13.3□□□□□ -0.28
SELENOF-204ENST00000467557 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
SELENOF-204ENST00000467557 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
SELENOF-204ENST00000467557 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
SELENOF-204ENST00000467557 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
SELENOF-204ENST00000467557 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
SELENOF-204ENST00000467557 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
SELENOF-204ENST00000467557 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
SELENOF-204ENST00000467557 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
SELENOF-204ENST00000467557 EIF4G3O43432 1585 aaKnown RBP13.18□□□□□ -0.3
SELENOF-204ENST00000467557 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
SELENOF-204ENST00000467557 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
SELENOF-204ENST00000467557 GAPVD1Q14C86 1478 aa13.13□□□□□ -0.31
SELENOF-204ENST00000467557 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
SELENOF-204ENST00000467557 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
SELENOF-204ENST00000467557 SNAPC4Q5SXM2 1469 aa13.09□□□□□ -0.31
SELENOF-204ENST00000467557 IGF1RP08069 1367 aa13.07□□□□□ -0.32
SELENOF-204ENST00000467557 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
SELENOF-204ENST00000467557 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
SELENOF-204ENST00000467557 MAGI1Q96QZ7 1491 aaPredicted RBP13.03□□□□□ -0.32
SELENOF-204ENST00000467557 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
SELENOF-204ENST00000467557 SYNJ2O15056 1496 aa13□□□□□ -0.33
SELENOF-204ENST00000467557 FBLN2P98095 1184 aa12.99□□□□□ -0.33
SELENOF-204ENST00000467557 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
SELENOF-204ENST00000467557 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
SELENOF-204ENST00000467557 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
SELENOF-204ENST00000467557 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
SELENOF-204ENST00000467557 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
SELENOF-204ENST00000467557 CHD1O14646 1710 aa12.95□□□□□ -0.34
SELENOF-204ENST00000467557 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
SELENOF-204ENST00000467557 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
SELENOF-204ENST00000467557 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
SELENOF-204ENST00000467557 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
SELENOF-204ENST00000467557 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
SELENOF-204ENST00000467557 NUP160Q12769 1436 aa12.91□□□□□ -0.34
SELENOF-204ENST00000467557 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
SELENOF-204ENST00000467557 CUL7Q14999 1698 aa12.89□□□□□ -0.35
SELENOF-204ENST00000467557 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
SELENOF-204ENST00000467557 EEA1Q15075 1411 aa12.88□□□□□ -0.35
SELENOF-204ENST00000467557 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
SELENOF-204ENST00000467557 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
SELENOF-204ENST00000467557 ERCC6L2Q5T890 1561 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms