RNA–Protein interactions for RNA: ENST00000317799.9

HADHB-201, Transcript of hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HADHB, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADHB-201ENST00000317799 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
HADHB-201ENST00000317799 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
HADHB-201ENST00000317799 ABCC9O60706 1549 aa24.11■■□□□ 1.45
HADHB-201ENST00000317799 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
HADHB-201ENST00000317799 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
HADHB-201ENST00000317799 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
HADHB-201ENST00000317799 NACADO15069 1562 aa23.44■■□□□ 1.34
HADHB-201ENST00000317799 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
HADHB-201ENST00000317799 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
HADHB-201ENST00000317799 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
HADHB-201ENST00000317799 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
HADHB-201ENST00000317799 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
HADHB-201ENST00000317799 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.2
HADHB-201ENST00000317799 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
HADHB-201ENST00000317799 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
HADHB-201ENST00000317799 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
HADHB-201ENST00000317799 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
HADHB-201ENST00000317799 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
HADHB-201ENST00000317799 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
HADHB-201ENST00000317799 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.08
HADHB-201ENST00000317799 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
HADHB-201ENST00000317799 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
HADHB-201ENST00000317799 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
HADHB-201ENST00000317799 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
HADHB-201ENST00000317799 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
HADHB-201ENST00000317799 WIZO95785 1651 aa21.63■■□□□ 1.05
HADHB-201ENST00000317799 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
HADHB-201ENST00000317799 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
HADHB-201ENST00000317799 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
HADHB-201ENST00000317799 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
HADHB-201ENST00000317799 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
HADHB-201ENST00000317799 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
HADHB-201ENST00000317799 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
HADHB-201ENST00000317799 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
HADHB-201ENST00000317799 NESP48681 1621 aa20.98■□□□□ 0.95
HADHB-201ENST00000317799 CFTRP13569 1480 aa20.94■□□□□ 0.94
HADHB-201ENST00000317799 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
HADHB-201ENST00000317799 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
HADHB-201ENST00000317799 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
HADHB-201ENST00000317799 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
HADHB-201ENST00000317799 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
HADHB-201ENST00000317799 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
HADHB-201ENST00000317799 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
HADHB-201ENST00000317799 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
HADHB-201ENST00000317799 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.88
HADHB-201ENST00000317799 WDR62O43379 1518 aa20.51■□□□□ 0.87
HADHB-201ENST00000317799 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
HADHB-201ENST00000317799 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
HADHB-201ENST00000317799 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
HADHB-201ENST00000317799 CUX1P39880 1505 aa20.45■□□□□ 0.86
HADHB-201ENST00000317799 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
HADHB-201ENST00000317799 CUX2O14529 1486 aa20.41■□□□□ 0.86
HADHB-201ENST00000317799 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
HADHB-201ENST00000317799 SYNJ1O43426 1573 aa20.39■□□□□ 0.86
HADHB-201ENST00000317799 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
HADHB-201ENST00000317799 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
HADHB-201ENST00000317799 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
HADHB-201ENST00000317799 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
HADHB-201ENST00000317799 SOGA1O94964 1423 aa20.24■□□□□ 0.83
HADHB-201ENST00000317799 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
HADHB-201ENST00000317799 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
HADHB-201ENST00000317799 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
HADHB-201ENST00000317799 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.83
HADHB-201ENST00000317799 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
HADHB-201ENST00000317799 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
HADHB-201ENST00000317799 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
HADHB-201ENST00000317799 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
HADHB-201ENST00000317799 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
HADHB-201ENST00000317799 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.83e-8■■■■□ 25.6
HADHB-201ENST00000317799 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
HADHB-201ENST00000317799 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
HADHB-201ENST00000317799 PBRM1Q86U86 1689 aa20■□□□□ 0.79
HADHB-201ENST00000317799 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
HADHB-201ENST00000317799 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
HADHB-201ENST00000317799 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
HADHB-201ENST00000317799 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
HADHB-201ENST00000317799 SNAPC4Q5SXM2 1469 aa19.88■□□□□ 0.77
HADHB-201ENST00000317799 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
HADHB-201ENST00000317799 EEA1Q15075 1411 aa19.86■□□□□ 0.77
HADHB-201ENST00000317799 IGF1RP08069 1367 aa19.86■□□□□ 0.77
HADHB-201ENST00000317799 CUL7Q14999 1698 aa19.83■□□□□ 0.76
HADHB-201ENST00000317799 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
HADHB-201ENST00000317799 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
HADHB-201ENST00000317799 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
HADHB-201ENST00000317799 CHD1O14646 1710 aa19.78■□□□□ 0.76
HADHB-201ENST00000317799 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
HADHB-201ENST00000317799 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
HADHB-201ENST00000317799 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
HADHB-201ENST00000317799 FBLN2P98095 1184 aa19.74■□□□□ 0.75
HADHB-201ENST00000317799 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
HADHB-201ENST00000317799 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
HADHB-201ENST00000317799 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
HADHB-201ENST00000317799 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
HADHB-201ENST00000317799 KIF21BO75037 1637 aa19.65■□□□□ 0.74
HADHB-201ENST00000317799 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
HADHB-201ENST00000317799 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
HADHB-201ENST00000317799 NUP160Q12769 1436 aa19.59■□□□□ 0.73
HADHB-201ENST00000317799 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
HADHB-201ENST00000317799 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
HADHB-201ENST00000317799 CTTNBP2Q8WZ74 1663 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms