RNA–Protein interactions for RNA: ENST00000550653.1

CCT2-211, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-211ENST00000550653 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
CCT2-211ENST00000550653 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
CCT2-211ENST00000550653 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
CCT2-211ENST00000550653 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
CCT2-211ENST00000550653 FOXD1Q16676 465 aa19.34■□□□□ 0.69
CCT2-211ENST00000550653 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
CCT2-211ENST00000550653 MSH5O43196 834 aa18.18■□□□□ 0.5
CCT2-211ENST00000550653 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
CCT2-211ENST00000550653 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
CCT2-211ENST00000550653 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
CCT2-211ENST00000550653 ADRA2BP18089 450 aa17.8■□□□□ 0.44
CCT2-211ENST00000550653 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CCT2-211ENST00000550653 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
CCT2-211ENST00000550653 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CCT2-211ENST00000550653 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
CCT2-211ENST00000550653 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
CCT2-211ENST00000550653 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
CCT2-211ENST00000550653 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
CCT2-211ENST00000550653 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
CCT2-211ENST00000550653 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
CCT2-211ENST00000550653 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
CCT2-211ENST00000550653 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
CCT2-211ENST00000550653 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
CCT2-211ENST00000550653 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
CCT2-211ENST00000550653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
CCT2-211ENST00000550653 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
CCT2-211ENST00000550653 U3KPZ7 1027 aaPredicted RBP14.56□□□□□ -0.08
CCT2-211ENST00000550653 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CCT2-211ENST00000550653 CAPN15O75808 1086 aa14.45□□□□□ -0.1
CCT2-211ENST00000550653 DSG3P32926 999 aa14.42□□□□□ -0.1
CCT2-211ENST00000550653 KCNA4P22459 653 aa14.29□□□□□ -0.12
CCT2-211ENST00000550653 POTEHQ6S545 545 aa14.27□□□□□ -0.13
CCT2-211ENST00000550653 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
CCT2-211ENST00000550653 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
CCT2-211ENST00000550653 ABCB7O75027 752 aa14.1□□□□□ -0.15
CCT2-211ENST00000550653 APLP2Q06481 763 aa14.08□□□□□ -0.16
CCT2-211ENST00000550653 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
CCT2-211ENST00000550653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
CCT2-211ENST00000550653 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
CCT2-211ENST00000550653 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
CCT2-211ENST00000550653 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
CCT2-211ENST00000550653 POLA2Q14181 598 aa13.7□□□□□ -0.22
CCT2-211ENST00000550653 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
CCT2-211ENST00000550653 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
CCT2-211ENST00000550653 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
CCT2-211ENST00000550653 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
CCT2-211ENST00000550653 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
CCT2-211ENST00000550653 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
CCT2-211ENST00000550653 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
CCT2-211ENST00000550653 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
CCT2-211ENST00000550653 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
CCT2-211ENST00000550653 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
CCT2-211ENST00000550653 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
CCT2-211ENST00000550653 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
CCT2-211ENST00000550653 ZBTB22O15209 634 aa13.13□□□□□ -0.31
CCT2-211ENST00000550653 HAX1O00165 279 aa13.06□□□□□ -0.32
CCT2-211ENST00000550653 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCT2-211ENST00000550653 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
CCT2-211ENST00000550653 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
CCT2-211ENST00000550653 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
CCT2-211ENST00000550653 FBLN2P98095 1184 aa12.91□□□□□ -0.34
CCT2-211ENST00000550653 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CCT2-211ENST00000550653 EVX2Q03828 476 aa12.9□□□□□ -0.34
CCT2-211ENST00000550653 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
CCT2-211ENST00000550653 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
CCT2-211ENST00000550653 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CCT2-211ENST00000550653 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
CCT2-211ENST00000550653 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
CCT2-211ENST00000550653 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
CCT2-211ENST00000550653 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
CCT2-211ENST00000550653 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
CCT2-211ENST00000550653 GABBR2O75899 941 aa12.56□□□□□ -0.4
CCT2-211ENST00000550653 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCT2-211ENST00000550653 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
CCT2-211ENST00000550653 LHX8Q68G74 356 aa12.42□□□□□ -0.42
CCT2-211ENST00000550653 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
CCT2-211ENST00000550653 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
CCT2-211ENST00000550653 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
CCT2-211ENST00000550653 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
CCT2-211ENST00000550653 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
CCT2-211ENST00000550653 CLCN6P51797 869 aa12.2□□□□□ -0.46
CCT2-211ENST00000550653 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
CCT2-211ENST00000550653 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
CCT2-211ENST00000550653 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
CCT2-211ENST00000550653 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
CCT2-211ENST00000550653 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
CCT2-211ENST00000550653 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
CCT2-211ENST00000550653 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
CCT2-211ENST00000550653 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
CCT2-211ENST00000550653 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
CCT2-211ENST00000550653 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
CCT2-211ENST00000550653 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
CCT2-211ENST00000550653 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCT2-211ENST00000550653 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
CCT2-211ENST00000550653 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
CCT2-211ENST00000550653 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
CCT2-211ENST00000550653 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
CCT2-211ENST00000550653 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
CCT2-211ENST00000550653 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
CCT2-211ENST00000550653 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms