Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 MTDHP2-201ENST00000601468 714 ntBASIC16.87■□□□□ 0.29
ZNF546Q86UE3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 AC007613.1-201ENST00000572811 2597 ntBASIC16.86■□□□□ 0.29
ZNF546Q86UE3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF546Q86UE3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 AL033527.3-201ENST00000566366 1196 ntBASIC16.85■□□□□ 0.29
ZNF546Q86UE3 AC092028.1-203ENST00000608262 953 ntBASIC16.85■□□□□ 0.29
ZNF546Q86UE3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF546Q86UE3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 KRT125P-201ENST00000546827 989 ntBASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC068587.7-201ENST00000641602 218 ntBASIC16.84■□□□□ 0.29
ZNF546Q86UE3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC092720.2-201ENST00000602388 1665 ntBASIC16.84■□□□□ 0.29
ZNF546Q86UE3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF546Q86UE3 AC093484.2-201ENST00000580996 2166 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms