Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 MIR3181-201ENST00000578512 73 ntBASIC17.5■□□□□ 0.39
CSF1P09603 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSF1P09603 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.5■□□□□ 0.39
CSF1P09603 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSF1P09603 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSF1P09603 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSF1P09603 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CSF1P09603 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSF1P09603 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.5■□□□□ 0.39
CSF1P09603 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 AC092720.2-201ENST00000602388 1665 ntBASIC17.49■□□□□ 0.39
CSF1P09603 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CSF1P09603 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CSF1P09603 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1P09603 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 AL137784.2-201ENST00000607332 1000 ntBASIC17.49■□□□□ 0.39
CSF1P09603 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CSF1P09603 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CSF1P09603 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1P09603 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1P09603 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1P09603 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CSF1P09603 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1P09603 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1P09603 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1P09603 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.48■□□□□ 0.39
CSF1P09603 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.48■□□□□ 0.39
CSF1P09603 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1P09603 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSF1P09603 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CSF1P09603 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1P09603 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSF1P09603 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.47■□□□□ 0.39
CSF1P09603 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.47■□□□□ 0.39
CSF1P09603 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.47■□□□□ 0.39
CSF1P09603 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.47■□□□□ 0.39
CSF1P09603 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1P09603 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSF1P09603 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CSF1P09603 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CSF1P09603 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.46■□□□□ 0.39
CSF1P09603 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CSF1P09603 AC090192.1-201ENST00000517740 490 ntBASIC17.46■□□□□ 0.39
CSF1P09603 AC010525.1-201ENST00000585559 441 ntBASIC17.46■□□□□ 0.39
CSF1P09603 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.46■□□□□ 0.39
CSF1P09603 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSF1P09603 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms