RNA–Protein interactions for RNA: ENST00000545664.5

SLC39A3-203, Transcript of solute carrier family 39 member 3, humanhuman

TSL 2 BASIC

Gene SLC39A3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-203ENST00000545664 NISCHQ9Y2I1 1504 aa53.83■■■■■ 6.21
SLC39A3-203ENST00000545664 CCDC180Q9P1Z9 1646 aa47.96■■■■■ 5.27
SLC39A3-203ENST00000545664 ABCC9O60706 1549 aa47.7■■■■■ 5.23
SLC39A3-203ENST00000545664 RB1CC1Q8TDY2 1594 aa45.45■■■■■ 4.87
SLC39A3-203ENST00000545664 DCAF8L2P0C7V8 631 aa45.43■■■■■ 4.86
SLC39A3-203ENST00000545664 NACADO15069 1562 aa45.24■■■■■ 4.83
SLC39A3-203ENST00000545664 ZCCHC6Q5VYS8 1495 aaKnown RBP44.72■■■■■ 4.75
SLC39A3-203ENST00000545664 MYO15BQ96JP2 1530 aa44.69■■■■■ 4.74
SLC39A3-203ENST00000545664 PABPN1Q86U42 306 aaKnown RBP eCLIP44.56■■■■■ 4.72
SLC39A3-203ENST00000545664 UNC13AQ9UPW8 1703 aa44.53■■■■■ 4.72
SLC39A3-203ENST00000545664 DCAF1Q9Y4B6 1507 aa44.35■■■■■ 4.69
SLC39A3-203ENST00000545664 DNAJC5BQ9UF47 199 aa44.33■■■■■ 4.69
SLC39A3-203ENST00000545664 BICRAQ9NZM4 1560 aa44.2■■■■■ 4.67
SLC39A3-203ENST00000545664 SCRIBQ14160 1630 aa43.96■■■■■ 4.63
SLC39A3-203ENST00000545664 SHROOM4Q9ULL8 1493 aa43.4■■■■■ 4.54
SLC39A3-203ENST00000545664 EIF4G1Q04637 1599 aaKnown RBP43.04■■■■■ 4.48
SLC39A3-203ENST00000545664 CC2D2AQ9P2K1 1620 aa43.04■■■■■ 4.48
SLC39A3-203ENST00000545664 CECR2Q9BXF3 1484 aa42.83■■■■■ 4.45
SLC39A3-203ENST00000545664 SMARCA4P51532 1647 aa41.89■■■■■ 4.3
SLC39A3-203ENST00000545664 ATAD2BQ9ULI0 1458 aa41.8■■■■■ 4.28
SLC39A3-203ENST00000545664 NCAPD3P42695 1498 aa41.78■■■■■ 4.28
SLC39A3-203ENST00000545664 BAZ1AQ9NRL2 1556 aaPredicted RBP41.7■■■■■ 4.27
SLC39A3-203ENST00000545664 SMARCA2P51531 1590 aa41.63■■■■■ 4.26
SLC39A3-203ENST00000545664 MROH2BQ7Z745 1585 aa41.57■■■■■ 4.25
SLC39A3-203ENST00000545664 HMGXB3Q12766 1538 aa41.5■■■■■ 4.23
SLC39A3-203ENST00000545664 BAZ1BQ9UIG0 1483 aaKnown RBP41.43■■■■■ 4.22
SLC39A3-203ENST00000545664 PEG3Q9GZU2 1588 aa41.37■■■■■ 4.21
SLC39A3-203ENST00000545664 NESP48681 1621 aa41.15■■■■■ 4.18
SLC39A3-203ENST00000545664 WIZO95785 1651 aa41.12■■■■■ 4.17
SLC39A3-203ENST00000545664 ERCC6Q03468 1493 aa41.08■■■■■ 4.17
SLC39A3-203ENST00000545664 RSF1Q96T23 1441 aaPredicted RBP40.86■■■■■ 4.13
SLC39A3-203ENST00000545664 LAMC3Q9Y6N6 1575 aa40.74■■■■■ 4.11
SLC39A3-203ENST00000545664 CUX2O14529 1486 aa40.7■■■■■ 4.11
SLC39A3-203ENST00000545664 CADPSQ9ULU8 1353 aa40.59■■■■■ 4.09
SLC39A3-203ENST00000545664 KIF21AQ7Z4S6 1674 aa40.57■■■■■ 4.09
SLC39A3-203ENST00000545664 TOP2AP11388 1531 aaKnown RBP40.53■■■■■ 4.08
SLC39A3-203ENST00000545664 THOC2Q8NI27 1593 aaKnown RBP40.51■■■■■ 4.08
SLC39A3-203ENST00000545664 PDS5BQ9NTI5 1447 aa40.5■■■■■ 4.07
SLC39A3-203ENST00000545664 CFTRP13569 1480 aa40.21■■■■■ 4.03
SLC39A3-203ENST00000545664 MRC2Q9UBG0 1479 aa40.18■■■■■ 4.02
SLC39A3-203ENST00000545664 FANCD2Q9BXW9 1451 aa40.16■■■■■ 4.02
SLC39A3-203ENST00000545664 DNAJC5Q9H3Z4 198 aa40.16■■■■■ 4.02
SLC39A3-203ENST00000545664 CCDC88BA6NC98 1476 aa40.13■■■■■ 4.02
SLC39A3-203ENST00000545664 CEP164Q9UPV0 1460 aa40.13■■■■■ 4.01
SLC39A3-203ENST00000545664 WDR62O43379 1518 aa40.03■■■■■ 4
SLC39A3-203ENST00000545664 URB2Q14146 1524 aaKnown RBP39.83■■■■□ 3.97
SLC39A3-203ENST00000545664 PRDM2Q13029 1718 aa39.82■■■■□ 3.97
SLC39A3-203ENST00000545664 SUPT5HO00267 1087 aaKnown RBP39.63■■■■□ 3.93
SLC39A3-203ENST00000545664 TOPBP1Q92547 1522 aa39.46■■■■□ 3.91
SLC39A3-203ENST00000545664 DNMBPQ6XZF7 1577 aa39.32■■■■□ 3.88
SLC39A3-203ENST00000545664 ZNF608Q9ULD9 1512 aaPredicted RBP39.3■■■■□ 3.88
SLC39A3-203ENST00000545664 IFT140Q96RY7 1462 aa39.28■■■■□ 3.88
SLC39A3-203ENST00000545664 ABCC8Q09428 1581 aa39.26■■■■□ 3.88
SLC39A3-203ENST00000545664 POLA1P09884 1462 aaPredicted RBP39.1■■■■□ 3.85
SLC39A3-203ENST00000545664 TARBP1Q13395 1621 aaKnown RBP39.05■■■■□ 3.84
SLC39A3-203ENST00000545664 RAD54L2Q9Y4B4 1467 aa39.04■■■■□ 3.84
SLC39A3-203ENST00000545664 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
SLC39A3-203ENST00000545664 CUX1P39880 1505 aa39.01■■■■□ 3.84
SLC39A3-203ENST00000545664 AQRO60306 1485 aaKnown RBP eCLIP39.01■■■■□ 3.845e-8■■□□□ 11.9
SLC39A3-203ENST00000545664 OSCARQ8IYS5 282 aa39.01■■■■□ 3.84
SLC39A3-203ENST00000545664 FGD5Q6ZNL6 1462 aa38.95■■■■□ 3.83
SLC39A3-203ENST00000545664 SOGA1O94964 1423 aa38.93■■■■□ 3.82
SLC39A3-203ENST00000545664 TDRD9Q8NDG6 1382 aaKnown RBP38.85■■■■□ 3.81
SLC39A3-203ENST00000545664 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
SLC39A3-203ENST00000545664 FBLN2P98095 1184 aa38.69■■■■□ 3.78
SLC39A3-203ENST00000545664 CHD1O14646 1710 aa38.67■■■■□ 3.78
SLC39A3-203ENST00000545664 SNAPC4Q5SXM2 1469 aa38.6■■■■□ 3.77
SLC39A3-203ENST00000545664 WDR97A6NE52 1622 aa38.6■■■■□ 3.77
SLC39A3-203ENST00000545664 SYNJ1O43426 1573 aa38.53■■■■□ 3.76
SLC39A3-203ENST00000545664 WRNQ14191 1432 aaPredicted RBP eCLIP38.52■■■■□ 3.76
SLC39A3-203ENST00000545664 RIMBP3CA6NJZ7 1639 aa38.49■■■■□ 3.75
SLC39A3-203ENST00000545664 RIMBP3BA6NNM3 1639 aa38.49■■■■□ 3.75
SLC39A3-203ENST00000545664 RIMBP3Q9UFD9 1639 aa38.49■■■■□ 3.75
SLC39A3-203ENST00000545664 GRIN2BQ13224 1484 aa38.48■■■■□ 3.75
SLC39A3-203ENST00000545664 ABCA10Q8WWZ4 1543 aa38.47■■■■□ 3.75
SLC39A3-203ENST00000545664 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
SLC39A3-203ENST00000545664 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
SLC39A3-203ENST00000545664 GAPVD1Q14C86 1478 aa38.45■■■■□ 3.75
SLC39A3-203ENST00000545664 PBRM1Q86U86 1689 aa38.42■■■■□ 3.74
SLC39A3-203ENST00000545664 ARHGEF11O15085 1522 aa38.4■■■■□ 3.74
SLC39A3-203ENST00000545664 CHMP7Q8WUX9 453 aaPredicted RBP38.4■■■■□ 3.74
SLC39A3-203ENST00000545664 MAGI1Q96QZ7 1491 aaPredicted RBP38.4■■■■□ 3.74
SLC39A3-203ENST00000545664 ABCA5Q8WWZ7 1642 aa38.38■■■■□ 3.74
SLC39A3-203ENST00000545664 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
SLC39A3-203ENST00000545664 CLASP1Q7Z460 1538 aa38.18■■■■□ 3.7
SLC39A3-203ENST00000545664 CYB5RLQ6IPT4 315 aa38.18■■■■□ 3.7
SLC39A3-203ENST00000545664 ARAP1Q96P48 1450 aa38.09■■■■□ 3.69
SLC39A3-203ENST00000545664 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
SLC39A3-203ENST00000545664 GRIN2AQ12879 1464 aa38.02■■■■□ 3.68
SLC39A3-203ENST00000545664 ERICH3Q5RHP9 1530 aa37.96■■■■□ 3.67
SLC39A3-203ENST00000545664 FHAD1B1AJZ9 1412 aa37.95■■■■□ 3.67
SLC39A3-203ENST00000545664 CEP170Q5SW79 1584 aa37.9■■■■□ 3.66
SLC39A3-203ENST00000545664 NUP160Q12769 1436 aa37.84■■■■□ 3.65
SLC39A3-203ENST00000545664 ERCC6L2Q5T890 1561 aa37.77■■■■□ 3.64
SLC39A3-203ENST00000545664 KIF27Q86VH2 1401 aa37.71■■■■□ 3.63
SLC39A3-203ENST00000545664 IGF1RP08069 1367 aa37.69■■■■□ 3.62
SLC39A3-203ENST00000545664 SHROOM2Q13796 1616 aa37.59■■■■□ 3.61
SLC39A3-203ENST00000545664 TRHP20396 242 aaPredicted RBP37.59■■■■□ 3.61
SLC39A3-203ENST00000545664 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.6
SLC39A3-203ENST00000545664 CUL7Q14999 1698 aa37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms