RNA–Protein interactions for RNA: ENST00000443358.6

PUS1-203, Transcript of pseudouridylate synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUS1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1-203ENST00000443358 NISCHQ9Y2I1 1504 aa50.98■■■■■ 5.75
PUS1-203ENST00000443358 CCDC180Q9P1Z9 1646 aa45.31■■■■■ 4.84
PUS1-203ENST00000443358 ABCC9O60706 1549 aa44.29■■■■■ 4.68
PUS1-203ENST00000443358 RB1CC1Q8TDY2 1594 aa42.63■■■■■ 4.41
PUS1-203ENST00000443358 NACADO15069 1562 aa42.6■■■■■ 4.41
PUS1-203ENST00000443358 DCAF8L2P0C7V8 631 aa42.55■■■■■ 4.4
PUS1-203ENST00000443358 ZCCHC6Q5VYS8 1495 aaKnown RBP42.47■■■■■ 4.39
PUS1-203ENST00000443358 MYO15BQ96JP2 1530 aa42.38■■■■■ 4.37
PUS1-203ENST00000443358 DCAF1Q9Y4B6 1507 aa42.19■■■■■ 4.35
PUS1-203ENST00000443358 UNC13AQ9UPW8 1703 aa41.69■■■■■ 4.26
PUS1-203ENST00000443358 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.22
PUS1-203ENST00000443358 BICRAQ9NZM4 1560 aa41.36■■■■■ 4.21
PUS1-203ENST00000443358 SCRIBQ14160 1630 aa41.32■■■■■ 4.2
PUS1-203ENST00000443358 SHROOM4Q9ULL8 1493 aa40.93■■■■■ 4.14
PUS1-203ENST00000443358 DNAJC5BQ9UF47 199 aa40.67■■■■■ 4.1
PUS1-203ENST00000443358 EIF4G1Q04637 1599 aaKnown RBP40.26■■■■■ 4.03
PUS1-203ENST00000443358 CC2D2AQ9P2K1 1620 aa40.08■■■■■ 4.01
PUS1-203ENST00000443358 CECR2Q9BXF3 1484 aa39.8■■■■□ 3.96
PUS1-203ENST00000443358 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
PUS1-203ENST00000443358 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
PUS1-203ENST00000443358 ATAD2BQ9ULI0 1458 aa39.33■■■■□ 3.89
PUS1-203ENST00000443358 NCAPD3P42695 1498 aa39.32■■■■□ 3.89
PUS1-203ENST00000443358 MROH2BQ7Z745 1585 aa39.28■■■■□ 3.88
PUS1-203ENST00000443358 SMARCA2P51531 1590 aa39.28■■■■□ 3.88
PUS1-203ENST00000443358 PEG3Q9GZU2 1588 aa39.18■■■■□ 3.86
PUS1-203ENST00000443358 HMGXB3Q12766 1538 aa39.11■■■■□ 3.85
PUS1-203ENST00000443358 BAZ1BQ9UIG0 1483 aaKnown RBP38.99■■■■□ 3.83
PUS1-203ENST00000443358 WIZO95785 1651 aa38.86■■■■□ 3.81
PUS1-203ENST00000443358 RSF1Q96T23 1441 aaPredicted RBP38.85■■■■□ 3.81
PUS1-203ENST00000443358 TOP2AP11388 1531 aaKnown RBP38.44■■■■□ 3.74
PUS1-203ENST00000443358 NESP48681 1621 aa38.35■■■■□ 3.73
PUS1-203ENST00000443358 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
PUS1-203ENST00000443358 CADPSQ9ULU8 1353 aa38.16■■■■□ 3.7
PUS1-203ENST00000443358 ERCC6Q03468 1493 aa38.16■■■■□ 3.7
PUS1-203ENST00000443358 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
PUS1-203ENST00000443358 CCDC88BA6NC98 1476 aa38■■■■□ 3.67
PUS1-203ENST00000443358 CFTRP13569 1480 aa37.95■■■■□ 3.67
PUS1-203ENST00000443358 KIF21AQ7Z4S6 1674 aa37.9■■■■□ 3.66
PUS1-203ENST00000443358 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
PUS1-203ENST00000443358 CUX2O14529 1486 aa37.77■■■■□ 3.64
PUS1-203ENST00000443358 THOC2Q8NI27 1593 aaKnown RBP37.76■■■■□ 3.64
PUS1-203ENST00000443358 FANCD2Q9BXW9 1451 aa37.72■■■■□ 3.63
PUS1-203ENST00000443358 CEP164Q9UPV0 1460 aa37.66■■■■□ 3.62
PUS1-203ENST00000443358 PRDM2Q13029 1718 aa37.66■■■■□ 3.62
PUS1-203ENST00000443358 MRC2Q9UBG0 1479 aa37.6■■■■□ 3.61
PUS1-203ENST00000443358 WDR62O43379 1518 aa37.48■■■■□ 3.59
PUS1-203ENST00000443358 URB2Q14146 1524 aaKnown RBP37.34■■■■□ 3.57
PUS1-203ENST00000443358 ABCC8Q09428 1581 aa37.12■■■■□ 3.53
PUS1-203ENST00000443358 TOPBP1Q92547 1522 aa37.12■■■■□ 3.53
PUS1-203ENST00000443358 DNMBPQ6XZF7 1577 aa37.07■■■■□ 3.52
PUS1-203ENST00000443358 IFT140Q96RY7 1462 aa36.87■■■■□ 3.49
PUS1-203ENST00000443358 CUX1P39880 1505 aa36.85■■■■□ 3.49
PUS1-203ENST00000443358 POLA1P09884 1462 aaPredicted RBP36.81■■■■□ 3.48
PUS1-203ENST00000443358 TARBP1Q13395 1621 aaKnown RBP36.73■■■■□ 3.47
PUS1-203ENST00000443358 FGD5Q6ZNL6 1462 aa36.71■■■■□ 3.47
PUS1-203ENST00000443358 ZNF608Q9ULD9 1512 aaPredicted RBP36.71■■■■□ 3.47
PUS1-203ENST00000443358 SOGA1O94964 1423 aa36.66■■■■□ 3.46
PUS1-203ENST00000443358 RAD54L2Q9Y4B4 1467 aa36.64■■■■□ 3.46
PUS1-203ENST00000443358 WRNQ14191 1432 aaPredicted RBP eCLIP36.61■■■■□ 3.45
PUS1-203ENST00000443358 DNAJC5Q9H3Z4 198 aa36.61■■■■□ 3.45
PUS1-203ENST00000443358 EIF4G3O43432 1585 aaKnown RBP36.57■■■■□ 3.44
PUS1-203ENST00000443358 TOP2BQ02880 1626 aa36.55■■■■□ 3.44
PUS1-203ENST00000443358 BIVM-ERCC5R4GMW8 1640 aa36.54■■■■□ 3.44
PUS1-203ENST00000443358 SYNJ1O43426 1573 aa36.52■■■■□ 3.44
PUS1-203ENST00000443358 AQRO60306 1485 aaKnown RBP eCLIP36.51■■■■□ 3.449e-7■■■■■ 27.5
PUS1-203ENST00000443358 TDRD9Q8NDG6 1382 aaKnown RBP36.44■■■■□ 3.42
PUS1-203ENST00000443358 WDR97A6NE52 1622 aa36.43■■■■□ 3.42
PUS1-203ENST00000443358 ABCA10Q8WWZ4 1543 aa36.37■■■■□ 3.41
PUS1-203ENST00000443358 GAPVD1Q14C86 1478 aa36.24■■■■□ 3.39
PUS1-203ENST00000443358 OSCARQ8IYS5 282 aa36.23■■■■□ 3.39
PUS1-203ENST00000443358 ABCA5Q8WWZ7 1642 aa36.22■■■■□ 3.39
PUS1-203ENST00000443358 GRIN2BQ13224 1484 aa36.22■■■■□ 3.39
PUS1-203ENST00000443358 SNAPC4Q5SXM2 1469 aa36.16■■■■□ 3.38
PUS1-203ENST00000443358 PBRM1Q86U86 1689 aa36.14■■■■□ 3.38
PUS1-203ENST00000443358 MAGI1Q96QZ7 1491 aaPredicted RBP36.13■■■■□ 3.37
PUS1-203ENST00000443358 CHD1O14646 1710 aa36.1■■■■□ 3.37
PUS1-203ENST00000443358 FBLN2P98095 1184 aa36.04■■■■□ 3.36
PUS1-203ENST00000443358 SYNJ2O15056 1496 aa35.99■■■■□ 3.35
PUS1-203ENST00000443358 CHMP7Q8WUX9 453 aaPredicted RBP35.97■■■■□ 3.35
PUS1-203ENST00000443358 ERICH3Q5RHP9 1530 aa35.94■■■■□ 3.34
PUS1-203ENST00000443358 ADAMTS12P58397 1594 aa35.86■■■■□ 3.33
PUS1-203ENST00000443358 KIF27Q86VH2 1401 aa35.85■■■■□ 3.33
PUS1-203ENST00000443358 FHAD1B1AJZ9 1412 aa35.82■■■■□ 3.32
PUS1-203ENST00000443358 GRIN2AQ12879 1464 aa35.76■■■■□ 3.32
PUS1-203ENST00000443358 TRIM41Q8WV44 630 aa35.75■■■■□ 3.31
PUS1-203ENST00000443358 IGF1RP08069 1367 aa35.72■■■■□ 3.31
PUS1-203ENST00000443358 CLASP1Q7Z460 1538 aa35.72■■■■□ 3.31
PUS1-203ENST00000443358 ARHGEF11O15085 1522 aa35.63■■■■□ 3.29
PUS1-203ENST00000443358 RIMBP3CA6NJZ7 1639 aa35.63■■■■□ 3.29
PUS1-203ENST00000443358 RIMBP3BA6NNM3 1639 aa35.63■■■■□ 3.29
PUS1-203ENST00000443358 RIMBP3Q9UFD9 1639 aa35.63■■■■□ 3.29
PUS1-203ENST00000443358 NUP160Q12769 1436 aa35.61■■■■□ 3.29
PUS1-203ENST00000443358 CUL7Q14999 1698 aa35.61■■■■□ 3.29
PUS1-203ENST00000443358 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
PUS1-203ENST00000443358 RUSC2Q8N2Y8 1516 aa35.54■■■■□ 3.28
PUS1-203ENST00000443358 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
PUS1-203ENST00000443358 CHIC1Q5VXU3 224 aa35.35■■■■□ 3.25
PUS1-203ENST00000443358 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
PUS1-203ENST00000443358 SHROOM2Q13796 1616 aa35.34■■■■□ 3.25
PUS1-203ENST00000443358 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms