Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.393e-7■■□□□ 13.4
PRPF8Q6P2Q9 AARS-207ENST00000569825 871 ntTSL 214.06□□□□□ -0.164e-7■■□□□ 13.4
PRPF8Q6P2Q9 TMEM214-212ENST00000478980 572 ntTSL 26.74□□□□□ -1.332e-9■■□□□ 13.4
PRPF8Q6P2Q9 GAK-204ENST00000504435 4346 ntTSL 210.23□□□□□ -0.773e-13■■□□□ 13.4
PRPF8Q6P2Q9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.284e-7■■□□□ 13.4
PRPF8Q6P2Q9 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.25□□□□□ -0.614e-7■■□□□ 13.4
PRPF8Q6P2Q9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.11□□□□□ -0.634e-7■■□□□ 13.4
PRPF8Q6P2Q9 SRRM2-207ENST00000571372 462 ntTSL 37.68□□□□□ -1.181e-9■■□□□ 13.4
PRPF8Q6P2Q9 TNRC18-207ENST00000440081 757 ntTSL 39.87□□□□□ -0.834e-10■■□□□ 13.4
PRPF8Q6P2Q9 ACAP3-204ENST00000379037 492 ntTSL 314.1□□□□□ -0.153e-11■■□□□ 13.4
PRPF8Q6P2Q9 DDC-209ENST00000489162 671 ntTSL 313.35□□□□□ -0.272e-8■■□□□ 13.4
PRPF8Q6P2Q9 TOB2-202ENST00000434408 777 ntTSL 217.68■□□□□ 0.421e-12■■□□□ 13.4
PRPF8Q6P2Q9 FAM207A-203ENST00000458015 643 ntTSL 517.12■□□□□ 0.336e-7■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-209ENST00000491134 1100 ntTSL 315.21■□□□□ 0.031e-12■■□□□ 13.4
PRPF8Q6P2Q9 AP3S2-216ENST00000617003 1561 ntBASIC13.78□□□□□ -0.21e-12■■□□□ 13.4
PRPF8Q6P2Q9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.371e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC10.93□□□□□ -0.661e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC10.18□□□□□ -0.781e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC9.23□□□□□ -0.931e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.311e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC6.24□□□□□ -1.411e-12■■□□□ 13.4
PRPF8Q6P2Q9 RBM39-232ENST00000481037 687 ntTSL 35.39□□□□□ -1.559e-13■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.591e-12■■□□□ 13.4
PRPF8Q6P2Q9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.33□□□□□ -1.721e-12■■□□□ 13.4
PRPF8Q6P2Q9 RBM39-210ENST00000425184 526 ntTSL 32.58□□□□□ -27e-13■■□□□ 13.4
PRPF8Q6P2Q9 TFAP4-202ENST00000572393 507 ntTSL 312.64□□□□□ -0.392e-6■■□□□ 13.4
PRPF8Q6P2Q9 TFAP4-205ENST00000575300 1326 ntTSL 211.09□□□□□ -0.632e-6■■□□□ 13.4
PRPF8Q6P2Q9 TFAP4-203ENST00000573476 785 ntTSL 310.4□□□□□ -0.742e-6■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-202ENST00000404045 1417 ntTSL 323.76■■□□□ 1.392e-7■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.362e-7■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-206ENST00000465334 957 ntTSL 223.38■■□□□ 1.332e-7■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-203ENST00000446942 1828 ntTSL 522.48■■□□□ 1.192e-7■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-204ENST00000460524 2276 ntTSL 521.65■■□□□ 1.062e-7■■□□□ 13.4
PRPF8Q6P2Q9 LRRC75B-207ENST00000491910 2943 ntTSL 217.14■□□□□ 0.332e-7■■□□□ 13.4
PRPF8Q6P2Q9 PI4KAP1-206ENST00000617243 2340 ntTSL 512.59□□□□□ -0.392e-9■■□□□ 13.4
PRPF8Q6P2Q9 GBA2-206ENST00000486797 772 ntTSL 511.75□□□□□ -0.533e-6■■□□□ 13.4
PRPF8Q6P2Q9 GBA2-207ENST00000488292 646 ntTSL 49.11□□□□□ -0.953e-6■■□□□ 13.4
PRPF8Q6P2Q9 FLNB-206ENST00000468939 573 ntTSL 210.36□□□□□ -0.753e-8■■□□□ 13.4
PRPF8Q6P2Q9 ELMOD3-216ENST00000462891 977 ntTSL 59.34□□□□□ -0.917e-7■■□□□ 13.4
PRPF8Q6P2Q9 TM2D3-215ENST00000561373 1734 ntTSL 2 BASIC9.01□□□□□ -0.973e-8■■□□□ 13.4
PRPF8Q6P2Q9 TM2D3-204ENST00000558129 864 ntTSL 38.16□□□□□ -1.13e-8■■□□□ 13.4
PRPF8Q6P2Q9 ELMOD3-218ENST00000476734 521 ntTSL 46.89□□□□□ -1.317e-7■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.442e-6■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.562e-6■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.582e-6■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.822e-6■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.042e-6■■□□□ 13.4
PRPF8Q6P2Q9 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.052e-6■■□□□ 13.4
PRPF8Q6P2Q9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.452e-7■■□□□ 13.4
PRPF8Q6P2Q9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.71□□□□□ -0.532e-7■■□□□ 13.4
PRPF8Q6P2Q9 POLD1-208ENST00000596648 1048 ntTSL 516.39■□□□□ 0.214e-7■■□□□ 13.4
PRPF8Q6P2Q9 DNMT1-212ENST00000587197 809 ntTSL 214.41□□□□□ -0.12e-7■■□□□ 13.4
PRPF8Q6P2Q9 GNAS-242ENST00000483387 593 ntTSL 27.77□□□□□ -1.174e-11■■□□□ 13.4
PRPF8Q6P2Q9 TNS2-218ENST00000552403 576 ntTSL 313.55□□□□□ -0.242e-6■■□□□ 13.4
PRPF8Q6P2Q9 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.766e-6■■□□□ 13.4
PRPF8Q6P2Q9 SEMA3B-211ENST00000612509 1061 ntTSL 515.31■□□□□ 0.044e-13■■□□□ 13.4
PRPF8Q6P2Q9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-9■■□□□ 13.4
PRPF8Q6P2Q9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.659e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.319e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.92■□□□□ 0.149e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.079e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.089e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-215ENST00000579780 611 ntTSL 313.7□□□□□ -0.225e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-228ENST00000583363 558 ntTSL 413.33□□□□□ -0.285e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-226ENST00000583182 709 ntTSL 313.08□□□□□ -0.315e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-213ENST00000579605 560 ntTSL 411.93□□□□□ -0.55e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-203ENST00000577442 617 ntTSL 410.85□□□□□ -0.675e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-222ENST00000581708 543 ntTSL 410.8□□□□□ -0.685e-7■■□□□ 13.4
PRPF8Q6P2Q9 CDK5RAP3-220ENST00000581160 490 ntTSL 37.46□□□□□ -1.215e-7■■□□□ 13.4
PRPF8Q6P2Q9 NUP210-204ENST00000485755 474 ntTSL 512.59□□□□□ -0.391e-14■■□□□ 13.4
PRPF8Q6P2Q9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.325e-6■■□□□ 13.4
PRPF8Q6P2Q9 FNTA-204ENST00000525699 516 ntTSL 522.12■■□□□ 1.135e-6■■□□□ 13.4
PRPF8Q6P2Q9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.835e-6■■□□□ 13.4
PRPF8Q6P2Q9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.71■□□□□ 0.595e-6■■□□□ 13.4
PRPF8Q6P2Q9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.39■□□□□ 0.535e-6■■□□□ 13.4
PRPF8Q6P2Q9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.35■□□□□ 0.535e-6■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.93■□□□□ 0.39e-7■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.85■□□□□ 0.292e-8■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-204ENST00000412397 1219 ntBASIC16.59■□□□□ 0.255e-6■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.182e-8■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-208ENST00000581645 1477 ntTSL 515.96■□□□□ 0.142e-8■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-213ENST00000440293 580 ntTSL 415.34■□□□□ 0.057e-11■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-212ENST00000434070 645 ntTSL 415.27■□□□□ 0.037e-11■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.13■□□□□ 0.012e-8■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-205ENST00000417902 576 ntTSL 315.08■□□□□ 07e-11■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-205ENST00000579856 952 ntTSL 514.78□□□□□ -0.042e-8■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-209ENST00000582459 1624 ntTSL 514.68□□□□□ -0.062e-8■■□□□ 13.4
PRPF8Q6P2Q9 DHX38-207ENST00000566329 683 ntTSL 214.52□□□□□ -0.085e-6■■□□□ 13.4
PRPF8Q6P2Q9 PFKFB2-204ENST00000464777 523 ntTSL 314.49□□□□□ -0.095e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAR1-205ENST00000532701 1109 ntTSL 214.01□□□□□ -0.175e-6■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-206ENST00000421231 583 ntTSL 413.56□□□□□ -0.247e-11■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-207ENST00000422254 593 ntTSL 413.56□□□□□ -0.247e-11■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-211ENST00000583090 683 ntTSL 313.39□□□□□ -0.272e-8■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-207ENST00000581546 1237 ntTSL 1 (best)13.33□□□□□ -0.282e-8■■□□□ 13.4
PRPF8Q6P2Q9 NICN1-206ENST00000494057 645 ntTSL 213.27□□□□□ -0.285e-6■■□□□ 13.4
PRPF8Q6P2Q9 MYO18B-210ENST00000543971 1768 ntTSL 213.18□□□□□ -0.35e-6■■□□□ 13.4
PRPF8Q6P2Q9 MYO18B-209ENST00000540454 1099 ntTSL 1 (best)13.01□□□□□ -0.335e-6■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-211ENST00000433685 402 ntTSL 312.99□□□□□ -0.337e-11■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-216ENST00000450805 579 ntTSL 412.99□□□□□ -0.337e-11■■□□□ 13.4
PRPF8Q6P2Q9 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.395e-6■■□□□ 13.4
Retrieved 100 of 73,762 protein–RNA pairs in 1286.1 ms