RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
CDK5RAP3-203ENST00000577442 CCDC180Q9P1Z9 1646 aa27.28■■□□□ 1.96
CDK5RAP3-203ENST00000577442 ABCC9O60706 1549 aa26.49■■□□□ 1.83
CDK5RAP3-203ENST00000577442 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
CDK5RAP3-203ENST00000577442 NACADO15069 1562 aa25.6■■□□□ 1.69
CDK5RAP3-203ENST00000577442 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
CDK5RAP3-203ENST00000577442 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
CDK5RAP3-203ENST00000577442 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
CDK5RAP3-203ENST00000577442 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
CDK5RAP3-203ENST00000577442 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
CDK5RAP3-203ENST00000577442 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
CDK5RAP3-203ENST00000577442 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
CDK5RAP3-203ENST00000577442 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
CDK5RAP3-203ENST00000577442 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
CDK5RAP3-203ENST00000577442 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
CDK5RAP3-203ENST00000577442 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
CDK5RAP3-203ENST00000577442 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
CDK5RAP3-203ENST00000577442 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
CDK5RAP3-203ENST00000577442 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
CDK5RAP3-203ENST00000577442 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
CDK5RAP3-203ENST00000577442 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
CDK5RAP3-203ENST00000577442 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
CDK5RAP3-203ENST00000577442 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
CDK5RAP3-203ENST00000577442 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
CDK5RAP3-203ENST00000577442 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
CDK5RAP3-203ENST00000577442 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
CDK5RAP3-203ENST00000577442 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
CDK5RAP3-203ENST00000577442 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
CDK5RAP3-203ENST00000577442 WIZO95785 1651 aa23.35■■□□□ 1.33
CDK5RAP3-203ENST00000577442 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
CDK5RAP3-203ENST00000577442 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
CDK5RAP3-203ENST00000577442 NESP48681 1621 aa22.93■■□□□ 1.26
CDK5RAP3-203ENST00000577442 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
CDK5RAP3-203ENST00000577442 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
CDK5RAP3-203ENST00000577442 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
CDK5RAP3-203ENST00000577442 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
CDK5RAP3-203ENST00000577442 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
CDK5RAP3-203ENST00000577442 CFTRP13569 1480 aa22.79■■□□□ 1.24
CDK5RAP3-203ENST00000577442 KIF21AQ7Z4S6 1674 aa22.72■■□□□ 1.23
CDK5RAP3-203ENST00000577442 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
CDK5RAP3-203ENST00000577442 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.21
CDK5RAP3-203ENST00000577442 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
CDK5RAP3-203ENST00000577442 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
CDK5RAP3-203ENST00000577442 CUX2O14529 1486 aa22.61■■□□□ 1.21
CDK5RAP3-203ENST00000577442 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
CDK5RAP3-203ENST00000577442 WDR62O43379 1518 aa22.49■■□□□ 1.19
CDK5RAP3-203ENST00000577442 URB2Q14146 1524 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP3-203ENST00000577442 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
CDK5RAP3-203ENST00000577442 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
CDK5RAP3-203ENST00000577442 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
CDK5RAP3-203ENST00000577442 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
CDK5RAP3-203ENST00000577442 CUX1P39880 1505 aa22.15■■□□□ 1.14
CDK5RAP3-203ENST00000577442 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
CDK5RAP3-203ENST00000577442 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
CDK5RAP3-203ENST00000577442 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
CDK5RAP3-203ENST00000577442 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP3-203ENST00000577442 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
CDK5RAP3-203ENST00000577442 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
CDK5RAP3-203ENST00000577442 SOGA1O94964 1423 aa22■■□□□ 1.11
CDK5RAP3-203ENST00000577442 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
CDK5RAP3-203ENST00000577442 ZNF608Q9ULD9 1512 aaPredicted RBP21.97■■□□□ 1.11
CDK5RAP3-203ENST00000577442 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CDK5RAP3-203ENST00000577442 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
CDK5RAP3-203ENST00000577442 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
CDK5RAP3-203ENST00000577442 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
CDK5RAP3-203ENST00000577442 AQRO60306 1485 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■■□□ 16.6
CDK5RAP3-203ENST00000577442 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-203ENST00000577442 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
CDK5RAP3-203ENST00000577442 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
CDK5RAP3-203ENST00000577442 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
CDK5RAP3-203ENST00000577442 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
CDK5RAP3-203ENST00000577442 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
CDK5RAP3-203ENST00000577442 DNAJC5Q9H3Z4 198 aa21.71■■□□□ 1.07
CDK5RAP3-203ENST00000577442 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
CDK5RAP3-203ENST00000577442 CHD1O14646 1710 aa21.65■■□□□ 1.06
CDK5RAP3-203ENST00000577442 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
CDK5RAP3-203ENST00000577442 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.05
CDK5RAP3-203ENST00000577442 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
CDK5RAP3-203ENST00000577442 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
CDK5RAP3-203ENST00000577442 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
CDK5RAP3-203ENST00000577442 FBLN2P98095 1184 aa21.59■■□□□ 1.05
CDK5RAP3-203ENST00000577442 ADAMTS12P58397 1594 aa21.58■■□□□ 1.05
CDK5RAP3-203ENST00000577442 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
CDK5RAP3-203ENST00000577442 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
CDK5RAP3-203ENST00000577442 CUL7Q14999 1698 aa21.49■■□□□ 1.03
CDK5RAP3-203ENST00000577442 GRIN2AQ12879 1464 aa21.48■■□□□ 1.03
CDK5RAP3-203ENST00000577442 IGF1RP08069 1367 aa21.45■■□□□ 1.02
CDK5RAP3-203ENST00000577442 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
CDK5RAP3-203ENST00000577442 NUP160Q12769 1436 aa21.38■■□□□ 1.01
CDK5RAP3-203ENST00000577442 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
CDK5RAP3-203ENST00000577442 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
CDK5RAP3-203ENST00000577442 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
CDK5RAP3-203ENST00000577442 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
CDK5RAP3-203ENST00000577442 EEA1Q15075 1411 aa21.31■■□□□ 1
CDK5RAP3-203ENST00000577442 ARHGEF11O15085 1522 aa21.31■■□□□ 1
CDK5RAP3-203ENST00000577442 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
CDK5RAP3-203ENST00000577442 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
CDK5RAP3-203ENST00000577442 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
CDK5RAP3-203ENST00000577442 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
CDK5RAP3-203ENST00000577442 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms