RNA–Protein interactions for RNA: ENST00000421231.5

HDAC7-206, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-206ENST00000421231 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
HDAC7-206ENST00000421231 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
HDAC7-206ENST00000421231 ABCC9O60706 1549 aa35.14■■■■□ 3.22
HDAC7-206ENST00000421231 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
HDAC7-206ENST00000421231 NACADO15069 1562 aa33.3■■■□□ 2.92
HDAC7-206ENST00000421231 DCAF8L2P0C7V8 631 aa33.01■■■□□ 2.87
HDAC7-206ENST00000421231 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
HDAC7-206ENST00000421231 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
HDAC7-206ENST00000421231 UNC13AQ9UPW8 1703 aa32.78■■■□□ 2.84
HDAC7-206ENST00000421231 PABPN1Q86U42 306 aaKnown RBP eCLIP32.71■■■□□ 2.83
HDAC7-206ENST00000421231 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
HDAC7-206ENST00000421231 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
HDAC7-206ENST00000421231 DCAF1Q9Y4B6 1507 aa32.5■■■□□ 2.79
HDAC7-206ENST00000421231 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
HDAC7-206ENST00000421231 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
HDAC7-206ENST00000421231 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
HDAC7-206ENST00000421231 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
HDAC7-206ENST00000421231 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
HDAC7-206ENST00000421231 NCAPD3P42695 1498 aa30.76■■■□□ 2.51
HDAC7-206ENST00000421231 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
HDAC7-206ENST00000421231 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
HDAC7-206ENST00000421231 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
HDAC7-206ENST00000421231 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
HDAC7-206ENST00000421231 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
HDAC7-206ENST00000421231 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
HDAC7-206ENST00000421231 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
HDAC7-206ENST00000421231 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
HDAC7-206ENST00000421231 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
HDAC7-206ENST00000421231 CUX2O14529 1486 aa30.27■■■□□ 2.44
HDAC7-206ENST00000421231 NESP48681 1621 aa30.23■■■□□ 2.43
HDAC7-206ENST00000421231 DNAJC5Q9H3Z4 198 aa30.19■■■□□ 2.42
HDAC7-206ENST00000421231 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
HDAC7-206ENST00000421231 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
HDAC7-206ENST00000421231 WIZO95785 1651 aa29.91■■■□□ 2.38
HDAC7-206ENST00000421231 KIF21AQ7Z4S6 1674 aa29.84■■■□□ 2.37
HDAC7-206ENST00000421231 PDS5BQ9NTI5 1447 aa29.82■■■□□ 2.36
HDAC7-206ENST00000421231 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
HDAC7-206ENST00000421231 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
HDAC7-206ENST00000421231 MRC2Q9UBG0 1479 aa29.58■■■□□ 2.33
HDAC7-206ENST00000421231 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
HDAC7-206ENST00000421231 WDR62O43379 1518 aa29.54■■■□□ 2.32
HDAC7-206ENST00000421231 CFTRP13569 1480 aa29.49■■■□□ 2.31
HDAC7-206ENST00000421231 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
HDAC7-206ENST00000421231 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
HDAC7-206ENST00000421231 URB2Q14146 1524 aaKnown RBP29.24■■■□□ 2.27
HDAC7-206ENST00000421231 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
HDAC7-206ENST00000421231 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
HDAC7-206ENST00000421231 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
HDAC7-206ENST00000421231 IFT140Q96RY7 1462 aa28.89■■■□□ 2.22
HDAC7-206ENST00000421231 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
HDAC7-206ENST00000421231 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
HDAC7-206ENST00000421231 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
HDAC7-206ENST00000421231 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
HDAC7-206ENST00000421231 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
HDAC7-206ENST00000421231 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
HDAC7-206ENST00000421231 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
HDAC7-206ENST00000421231 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
HDAC7-206ENST00000421231 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.172e-7■■■■□ 25.9
HDAC7-206ENST00000421231 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
HDAC7-206ENST00000421231 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
HDAC7-206ENST00000421231 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
HDAC7-206ENST00000421231 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
HDAC7-206ENST00000421231 SOGA1O94964 1423 aa28.47■■■□□ 2.15
HDAC7-206ENST00000421231 CUX1P39880 1505 aa28.46■■■□□ 2.15
HDAC7-206ENST00000421231 CHD1O14646 1710 aa28.46■■■□□ 2.15
HDAC7-206ENST00000421231 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
HDAC7-206ENST00000421231 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
HDAC7-206ENST00000421231 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
HDAC7-206ENST00000421231 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
HDAC7-206ENST00000421231 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
HDAC7-206ENST00000421231 FBLN2P98095 1184 aa28.3■■■□□ 2.12
HDAC7-206ENST00000421231 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
HDAC7-206ENST00000421231 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
HDAC7-206ENST00000421231 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
HDAC7-206ENST00000421231 CYB5RLQ6IPT4 315 aa28.18■■■□□ 2.1
HDAC7-206ENST00000421231 ARAP1Q96P48 1450 aa28.18■■■□□ 2.1
HDAC7-206ENST00000421231 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
HDAC7-206ENST00000421231 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
HDAC7-206ENST00000421231 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
HDAC7-206ENST00000421231 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
HDAC7-206ENST00000421231 SYNJ2O15056 1496 aa28.13■■■□□ 2.09
HDAC7-206ENST00000421231 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
HDAC7-206ENST00000421231 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
HDAC7-206ENST00000421231 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
HDAC7-206ENST00000421231 BIVM-ERCC5R4GMW8 1640 aa28.02■■■□□ 2.08
HDAC7-206ENST00000421231 TOP2BQ02880 1626 aa28■■■□□ 2.07
HDAC7-206ENST00000421231 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.075e-6■■■■■ 29.2
HDAC7-206ENST00000421231 ADAMTS12P58397 1594 aa27.88■■■□□ 2.05
HDAC7-206ENST00000421231 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
HDAC7-206ENST00000421231 NUP160Q12769 1436 aa27.81■■■□□ 2.04
HDAC7-206ENST00000421231 TRHP20396 242 aaPredicted RBP27.79■■■□□ 2.04
HDAC7-206ENST00000421231 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
HDAC7-206ENST00000421231 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
HDAC7-206ENST00000421231 FHAD1B1AJZ9 1412 aa27.78■■■□□ 2.04
HDAC7-206ENST00000421231 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
HDAC7-206ENST00000421231 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
HDAC7-206ENST00000421231 RUSC2Q8N2Y8 1516 aa27.48■■□□□ 1.99
HDAC7-206ENST00000421231 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
HDAC7-206ENST00000421231 JPH4Q96JJ6 628 aa27.47■■□□□ 1.99
HDAC7-206ENST00000421231 IGF1RP08069 1367 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms