RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
RBM39-210ENST00000425184 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
RBM39-210ENST00000425184 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
RBM39-210ENST00000425184 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
RBM39-210ENST00000425184 FOXD1Q16676 465 aa18.08■□□□□ 0.48
RBM39-210ENST00000425184 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
RBM39-210ENST00000425184 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
RBM39-210ENST00000425184 ADRA2BP18089 450 aa17.24■□□□□ 0.35
RBM39-210ENST00000425184 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
RBM39-210ENST00000425184 MSH5O43196 834 aa16.78■□□□□ 0.28
RBM39-210ENST00000425184 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
RBM39-210ENST00000425184 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
RBM39-210ENST00000425184 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
RBM39-210ENST00000425184 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
RBM39-210ENST00000425184 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
RBM39-210ENST00000425184 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
RBM39-210ENST00000425184 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
RBM39-210ENST00000425184 KCNA4P22459 653 aa15.25■□□□□ 0.03
RBM39-210ENST00000425184 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
RBM39-210ENST00000425184 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
RBM39-210ENST00000425184 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
RBM39-210ENST00000425184 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
RBM39-210ENST00000425184 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
RBM39-210ENST00000425184 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
RBM39-210ENST00000425184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.19e-14■■□□□ 11.5
RBM39-210ENST00000425184 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
RBM39-210ENST00000425184 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
RBM39-210ENST00000425184 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
RBM39-210ENST00000425184 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
RBM39-210ENST00000425184 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
RBM39-210ENST00000425184 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
RBM39-210ENST00000425184 ZBTB22O15209 634 aa14.01□□□□□ -0.17
RBM39-210ENST00000425184 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
RBM39-210ENST00000425184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
RBM39-210ENST00000425184 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
RBM39-210ENST00000425184 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
RBM39-210ENST00000425184 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
RBM39-210ENST00000425184 APLP2Q06481 763 aa13.89□□□□□ -0.19
RBM39-210ENST00000425184 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
RBM39-210ENST00000425184 CAPN15O75808 1086 aa13.8□□□□□ -0.2
RBM39-210ENST00000425184 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
RBM39-210ENST00000425184 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
RBM39-210ENST00000425184 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
RBM39-210ENST00000425184 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
RBM39-210ENST00000425184 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
RBM39-210ENST00000425184 DSG3P32926 999 aa13.58□□□□□ -0.24
RBM39-210ENST00000425184 ABCB7O75027 752 aa13.5□□□□□ -0.25
RBM39-210ENST00000425184 POLA2Q14181 598 aa13.43□□□□□ -0.26
RBM39-210ENST00000425184 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
RBM39-210ENST00000425184 FBLN2P98095 1184 aa13.11□□□□□ -0.31
RBM39-210ENST00000425184 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
RBM39-210ENST00000425184 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
RBM39-210ENST00000425184 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
RBM39-210ENST00000425184 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
RBM39-210ENST00000425184 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
RBM39-210ENST00000425184 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
RBM39-210ENST00000425184 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
RBM39-210ENST00000425184 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
RBM39-210ENST00000425184 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
RBM39-210ENST00000425184 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
RBM39-210ENST00000425184 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
RBM39-210ENST00000425184 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
RBM39-210ENST00000425184 FKBP8Q14318 412 aa12.52□□□□□ -0.41
RBM39-210ENST00000425184 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
RBM39-210ENST00000425184 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
RBM39-210ENST00000425184 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
RBM39-210ENST00000425184 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
RBM39-210ENST00000425184 PROM2Q8N271 834 aa12.41□□□□□ -0.42
RBM39-210ENST00000425184 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
RBM39-210ENST00000425184 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
RBM39-210ENST00000425184 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.447e-33■■□□□ 11.8
RBM39-210ENST00000425184 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
RBM39-210ENST00000425184 POTEHQ6S545 545 aa12.27□□□□□ -0.45
RBM39-210ENST00000425184 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
RBM39-210ENST00000425184 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
RBM39-210ENST00000425184 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
RBM39-210ENST00000425184 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
RBM39-210ENST00000425184 MIER1Q8N108 512 aa12.04□□□□□ -0.48
RBM39-210ENST00000425184 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
RBM39-210ENST00000425184 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
RBM39-210ENST00000425184 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
RBM39-210ENST00000425184 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
RBM39-210ENST00000425184 HAX1O00165 279 aa11.96□□□□□ -0.49
RBM39-210ENST00000425184 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBM39-210ENST00000425184 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
RBM39-210ENST00000425184 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
RBM39-210ENST00000425184 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
RBM39-210ENST00000425184 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
RBM39-210ENST00000425184 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
RBM39-210ENST00000425184 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
RBM39-210ENST00000425184 EVX2Q03828 476 aa11.79□□□□□ -0.52
RBM39-210ENST00000425184 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
RBM39-210ENST00000425184 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
RBM39-210ENST00000425184 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
RBM39-210ENST00000425184 NUBP1P53384 320 aa11.72□□□□□ -0.53
RBM39-210ENST00000425184 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
RBM39-210ENST00000425184 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
RBM39-210ENST00000425184 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
RBM39-210ENST00000425184 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
RBM39-210ENST00000425184 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms