RNA–Protein interactions for RNA: ENST00000573476.1

TFAP4-203, Transcript of transcription factor AP-4, humanhuman

TSL 3

Gene TFAP4, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-203ENST00000573476 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
TFAP4-203ENST00000573476 ABCC9O60706 1549 aa27.41■■□□□ 1.98
TFAP4-203ENST00000573476 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
TFAP4-203ENST00000573476 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
TFAP4-203ENST00000573476 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
TFAP4-203ENST00000573476 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
TFAP4-203ENST00000573476 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
TFAP4-203ENST00000573476 NACADO15069 1562 aa25.22■■□□□ 1.63
TFAP4-203ENST00000573476 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
TFAP4-203ENST00000573476 UNC13AQ9UPW8 1703 aa24.93■■□□□ 1.58
TFAP4-203ENST00000573476 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
TFAP4-203ENST00000573476 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
TFAP4-203ENST00000573476 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
TFAP4-203ENST00000573476 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
TFAP4-203ENST00000573476 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
TFAP4-203ENST00000573476 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
TFAP4-203ENST00000573476 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
TFAP4-203ENST00000573476 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
TFAP4-203ENST00000573476 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
TFAP4-203ENST00000573476 CUX2O14529 1486 aa23.87■■□□□ 1.41
TFAP4-203ENST00000573476 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
TFAP4-203ENST00000573476 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
TFAP4-203ENST00000573476 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
TFAP4-203ENST00000573476 NESP48681 1621 aa23.31■■□□□ 1.32
TFAP4-203ENST00000573476 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
TFAP4-203ENST00000573476 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
TFAP4-203ENST00000573476 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
TFAP4-203ENST00000573476 SMARCA2P51531 1590 aa23■■□□□ 1.27
TFAP4-203ENST00000573476 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
TFAP4-203ENST00000573476 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
TFAP4-203ENST00000573476 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
TFAP4-203ENST00000573476 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
TFAP4-203ENST00000573476 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
TFAP4-203ENST00000573476 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
TFAP4-203ENST00000573476 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
TFAP4-203ENST00000573476 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
TFAP4-203ENST00000573476 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
TFAP4-203ENST00000573476 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
TFAP4-203ENST00000573476 WDR62O43379 1518 aa22.62■■□□□ 1.21
TFAP4-203ENST00000573476 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
TFAP4-203ENST00000573476 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
TFAP4-203ENST00000573476 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
TFAP4-203ENST00000573476 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
TFAP4-203ENST00000573476 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
TFAP4-203ENST00000573476 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
TFAP4-203ENST00000573476 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
TFAP4-203ENST00000573476 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
TFAP4-203ENST00000573476 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
TFAP4-203ENST00000573476 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
TFAP4-203ENST00000573476 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
TFAP4-203ENST00000573476 CFTRP13569 1480 aa22.17■■□□□ 1.14
TFAP4-203ENST00000573476 WIZO95785 1651 aa22.14■■□□□ 1.14
TFAP4-203ENST00000573476 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
TFAP4-203ENST00000573476 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
TFAP4-203ENST00000573476 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
TFAP4-203ENST00000573476 FBLN2P98095 1184 aa21.98■■□□□ 1.11
TFAP4-203ENST00000573476 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
TFAP4-203ENST00000573476 AQRO60306 1485 aaKnown RBP eCLIP21.86■■□□□ 1.093e-6■■■■□ 19.6
TFAP4-203ENST00000573476 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
TFAP4-203ENST00000573476 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
TFAP4-203ENST00000573476 CHD1O14646 1710 aa21.82■■□□□ 1.08
TFAP4-203ENST00000573476 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
TFAP4-203ENST00000573476 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
TFAP4-203ENST00000573476 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
TFAP4-203ENST00000573476 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
TFAP4-203ENST00000573476 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
TFAP4-203ENST00000573476 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.05
TFAP4-203ENST00000573476 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
TFAP4-203ENST00000573476 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
TFAP4-203ENST00000573476 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
TFAP4-203ENST00000573476 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
TFAP4-203ENST00000573476 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
TFAP4-203ENST00000573476 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
TFAP4-203ENST00000573476 SOGA1O94964 1423 aa21.52■■□□□ 1.04
TFAP4-203ENST00000573476 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
TFAP4-203ENST00000573476 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
TFAP4-203ENST00000573476 ILDR1Q86SU0 546 aaPredicted RBP21.49■■□□□ 1.03
TFAP4-203ENST00000573476 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
TFAP4-203ENST00000573476 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
TFAP4-203ENST00000573476 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
TFAP4-203ENST00000573476 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
TFAP4-203ENST00000573476 WDR97A6NE52 1622 aa21.29■■□□□ 1
TFAP4-203ENST00000573476 ERCC6L2Q5T890 1561 aa21.27■□□□□ 0.99
TFAP4-203ENST00000573476 KDM4FA0A1W2PPD8 638 aa21.26■□□□□ 0.99
TFAP4-203ENST00000573476 FAM69CQ0P6D2 419 aa21.17■□□□□ 0.98
TFAP4-203ENST00000573476 CUX1P39880 1505 aa21.16■□□□□ 0.98
TFAP4-203ENST00000573476 KIF13AQ9H1H9 1805 aa21.13■□□□□ 0.97
TFAP4-203ENST00000573476 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
TFAP4-203ENST00000573476 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
TFAP4-203ENST00000573476 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
TFAP4-203ENST00000573476 NUP160Q12769 1436 aa21.04■□□□□ 0.96
TFAP4-203ENST00000573476 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
TFAP4-203ENST00000573476 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
TFAP4-203ENST00000573476 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
TFAP4-203ENST00000573476 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
TFAP4-203ENST00000573476 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
TFAP4-203ENST00000573476 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
TFAP4-203ENST00000573476 JPH4Q96JJ6 628 aa20.95■□□□□ 0.94
TFAP4-203ENST00000573476 KDM6BO15054 1643 aa20.94■□□□□ 0.94
TFAP4-203ENST00000573476 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms