RNA–Protein interactions for RNA: ENST00000583090.1

SCRN2-211, Transcript of secernin 2, humanhuman

TSL 3

Gene SCRN2, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN2-211ENST00000583090 NISCHQ9Y2I1 1504 aa38.51■■■■□ 3.76
SCRN2-211ENST00000583090 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
SCRN2-211ENST00000583090 ABCC9O60706 1549 aa34.15■■■■□ 3.06
SCRN2-211ENST00000583090 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
SCRN2-211ENST00000583090 NACADO15069 1562 aa32.46■■■□□ 2.79
SCRN2-211ENST00000583090 DCAF8L2P0C7V8 631 aa32.37■■■□□ 2.77
SCRN2-211ENST00000583090 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
SCRN2-211ENST00000583090 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
SCRN2-211ENST00000583090 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
SCRN2-211ENST00000583090 PABPN1Q86U42 306 aaKnown RBP eCLIP31.85■■■□□ 2.69
SCRN2-211ENST00000583090 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
SCRN2-211ENST00000583090 DNAJC5BQ9UF47 199 aa31.8■■■□□ 2.68
SCRN2-211ENST00000583090 BICRAQ9NZM4 1560 aa31.7■■■□□ 2.67
SCRN2-211ENST00000583090 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
SCRN2-211ENST00000583090 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
SCRN2-211ENST00000583090 CC2D2AQ9P2K1 1620 aa30.87■■■□□ 2.53
SCRN2-211ENST00000583090 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
SCRN2-211ENST00000583090 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
SCRN2-211ENST00000583090 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
SCRN2-211ENST00000583090 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
SCRN2-211ENST00000583090 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
SCRN2-211ENST00000583090 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
SCRN2-211ENST00000583090 SMARCA2P51531 1590 aa29.84■■■□□ 2.37
SCRN2-211ENST00000583090 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
SCRN2-211ENST00000583090 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
SCRN2-211ENST00000583090 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
SCRN2-211ENST00000583090 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
SCRN2-211ENST00000583090 NESP48681 1621 aa29.45■■■□□ 2.3
SCRN2-211ENST00000583090 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
SCRN2-211ENST00000583090 WIZO95785 1651 aa29.38■■■□□ 2.29
SCRN2-211ENST00000583090 CUX2O14529 1486 aa29.26■■■□□ 2.27
SCRN2-211ENST00000583090 LAMC3Q9Y6N6 1575 aa29.24■■■□□ 2.27
SCRN2-211ENST00000583090 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
SCRN2-211ENST00000583090 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
SCRN2-211ENST00000583090 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
SCRN2-211ENST00000583090 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
SCRN2-211ENST00000583090 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
SCRN2-211ENST00000583090 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
SCRN2-211ENST00000583090 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
SCRN2-211ENST00000583090 CFTRP13569 1480 aa28.8■■■□□ 2.2
SCRN2-211ENST00000583090 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
SCRN2-211ENST00000583090 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
SCRN2-211ENST00000583090 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
SCRN2-211ENST00000583090 WDR62O43379 1518 aa28.73■■■□□ 2.19
SCRN2-211ENST00000583090 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
SCRN2-211ENST00000583090 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
SCRN2-211ENST00000583090 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
SCRN2-211ENST00000583090 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
SCRN2-211ENST00000583090 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
SCRN2-211ENST00000583090 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
SCRN2-211ENST00000583090 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
SCRN2-211ENST00000583090 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
SCRN2-211ENST00000583090 ZNF608Q9ULD9 1512 aaPredicted RBP28.12■■■□□ 2.09
SCRN2-211ENST00000583090 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
SCRN2-211ENST00000583090 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
SCRN2-211ENST00000583090 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
SCRN2-211ENST00000583090 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
SCRN2-211ENST00000583090 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.053e-6■■■■■ 28.9
SCRN2-211ENST00000583090 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
SCRN2-211ENST00000583090 CUX1P39880 1505 aa27.88■■■□□ 2.05
SCRN2-211ENST00000583090 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SCRN2-211ENST00000583090 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
SCRN2-211ENST00000583090 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
SCRN2-211ENST00000583090 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
SCRN2-211ENST00000583090 CHD1O14646 1710 aa27.74■■■□□ 2.03
SCRN2-211ENST00000583090 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
SCRN2-211ENST00000583090 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
SCRN2-211ENST00000583090 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
SCRN2-211ENST00000583090 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
SCRN2-211ENST00000583090 FBLN2P98095 1184 aa27.63■■■□□ 2.01
SCRN2-211ENST00000583090 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
SCRN2-211ENST00000583090 ARHGEF11O15085 1522 aa27.57■■■□□ 2
SCRN2-211ENST00000583090 GRIN2BQ13224 1484 aa27.55■■■□□ 2
SCRN2-211ENST00000583090 ABCA10Q8WWZ4 1543 aa27.53■■■□□ 2
SCRN2-211ENST00000583090 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
SCRN2-211ENST00000583090 PBRM1Q86U86 1689 aa27.52■■■□□ 2
SCRN2-211ENST00000583090 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
SCRN2-211ENST00000583090 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
SCRN2-211ENST00000583090 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
SCRN2-211ENST00000583090 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
SCRN2-211ENST00000583090 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
SCRN2-211ENST00000583090 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
SCRN2-211ENST00000583090 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
SCRN2-211ENST00000583090 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
SCRN2-211ENST00000583090 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
SCRN2-211ENST00000583090 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
SCRN2-211ENST00000583090 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
SCRN2-211ENST00000583090 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
SCRN2-211ENST00000583090 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
SCRN2-211ENST00000583090 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
SCRN2-211ENST00000583090 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
SCRN2-211ENST00000583090 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
SCRN2-211ENST00000583090 NUP160Q12769 1436 aa27.1■■□□□ 1.93
SCRN2-211ENST00000583090 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
SCRN2-211ENST00000583090 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
SCRN2-211ENST00000583090 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
SCRN2-211ENST00000583090 IGF1RP08069 1367 aa26.93■■□□□ 1.9
SCRN2-211ENST00000583090 TRHP20396 242 aaPredicted RBP26.92■■□□□ 1.9
SCRN2-211ENST00000583090 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
SCRN2-211ENST00000583090 CUL7Q14999 1698 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms