RNA–Protein interactions for RNA: ENST00000494057.5

NICN1-206, Transcript of nicolin 1, humanhuman

TSL 2

Gene NICN1, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-206ENST00000494057 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
NICN1-206ENST00000494057 ABCC9O60706 1549 aa34.68■■■■□ 3.14
NICN1-206ENST00000494057 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
NICN1-206ENST00000494057 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
NICN1-206ENST00000494057 DNAJC5BQ9UF47 199 aa32.79■■■□□ 2.84
NICN1-206ENST00000494057 NACADO15069 1562 aa32.59■■■□□ 2.81
NICN1-206ENST00000494057 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
NICN1-206ENST00000494057 PABPN1Q86U42 306 aaKnown RBP eCLIP32.22■■■□□ 2.75
NICN1-206ENST00000494057 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
NICN1-206ENST00000494057 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
NICN1-206ENST00000494057 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
NICN1-206ENST00000494057 ZCCHC6Q5VYS8 1495 aaKnown RBP31.54■■■□□ 2.64
NICN1-206ENST00000494057 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
NICN1-206ENST00000494057 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
NICN1-206ENST00000494057 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
NICN1-206ENST00000494057 CECR2Q9BXF3 1484 aa31.3■■■□□ 2.6
NICN1-206ENST00000494057 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
NICN1-206ENST00000494057 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
NICN1-206ENST00000494057 DNAJC5Q9H3Z4 198 aa30.41■■■□□ 2.46
NICN1-206ENST00000494057 CUX2O14529 1486 aa30.09■■■□□ 2.41
NICN1-206ENST00000494057 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
NICN1-206ENST00000494057 ERCC6Q03468 1493 aa30.01■■■□□ 2.4
NICN1-206ENST00000494057 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
NICN1-206ENST00000494057 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
NICN1-206ENST00000494057 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
NICN1-206ENST00000494057 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
NICN1-206ENST00000494057 NESP48681 1621 aa29.68■■■□□ 2.34
NICN1-206ENST00000494057 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
NICN1-206ENST00000494057 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.33
NICN1-206ENST00000494057 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
NICN1-206ENST00000494057 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
NICN1-206ENST00000494057 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
NICN1-206ENST00000494057 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
NICN1-206ENST00000494057 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
NICN1-206ENST00000494057 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
NICN1-206ENST00000494057 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
NICN1-206ENST00000494057 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
NICN1-206ENST00000494057 WDR62O43379 1518 aa29.02■■■□□ 2.24
NICN1-206ENST00000494057 WIZO95785 1651 aa28.96■■■□□ 2.23
NICN1-206ENST00000494057 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
NICN1-206ENST00000494057 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
NICN1-206ENST00000494057 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
NICN1-206ENST00000494057 CFTRP13569 1480 aa28.76■■■□□ 2.19
NICN1-206ENST00000494057 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
NICN1-206ENST00000494057 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
NICN1-206ENST00000494057 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
NICN1-206ENST00000494057 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
NICN1-206ENST00000494057 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
NICN1-206ENST00000494057 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
NICN1-206ENST00000494057 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
NICN1-206ENST00000494057 RIMBP3CA6NJZ7 1639 aa28.28■■■□□ 2.12
NICN1-206ENST00000494057 RIMBP3BA6NNM3 1639 aa28.28■■■□□ 2.12
NICN1-206ENST00000494057 RIMBP3Q9UFD9 1639 aa28.28■■■□□ 2.12
NICN1-206ENST00000494057 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
NICN1-206ENST00000494057 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
NICN1-206ENST00000494057 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
NICN1-206ENST00000494057 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
NICN1-206ENST00000494057 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
NICN1-206ENST00000494057 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
NICN1-206ENST00000494057 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
NICN1-206ENST00000494057 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.073e-7■■■□□ 17
NICN1-206ENST00000494057 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
NICN1-206ENST00000494057 CHD1O14646 1710 aa27.95■■■□□ 2.06
NICN1-206ENST00000494057 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
NICN1-206ENST00000494057 FBLN2P98095 1184 aa27.88■■■□□ 2.05
NICN1-206ENST00000494057 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
NICN1-206ENST00000494057 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
NICN1-206ENST00000494057 SOGA1O94964 1423 aa27.78■■■□□ 2.04
NICN1-206ENST00000494057 TRHP20396 242 aaPredicted RBP27.77■■■□□ 2.04
NICN1-206ENST00000494057 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
NICN1-206ENST00000494057 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
NICN1-206ENST00000494057 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
NICN1-206ENST00000494057 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
NICN1-206ENST00000494057 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
NICN1-206ENST00000494057 MAGI1Q96QZ7 1491 aaPredicted RBP27.65■■■□□ 2.02
NICN1-206ENST00000494057 SYNJ1O43426 1573 aa27.64■■■□□ 2.01
NICN1-206ENST00000494057 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
NICN1-206ENST00000494057 CUX1P39880 1505 aa27.62■■■□□ 2.01
NICN1-206ENST00000494057 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
NICN1-206ENST00000494057 SYNJ2O15056 1496 aa27.56■■■□□ 2
NICN1-206ENST00000494057 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
NICN1-206ENST00000494057 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
NICN1-206ENST00000494057 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
NICN1-206ENST00000494057 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
NICN1-206ENST00000494057 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
NICN1-206ENST00000494057 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
NICN1-206ENST00000494057 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.95
NICN1-206ENST00000494057 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
NICN1-206ENST00000494057 ERCC6L2Q5T890 1561 aa27.17■■□□□ 1.94
NICN1-206ENST00000494057 NUP160Q12769 1436 aa27.16■■□□□ 1.94
NICN1-206ENST00000494057 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
NICN1-206ENST00000494057 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
NICN1-206ENST00000494057 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
NICN1-206ENST00000494057 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
NICN1-206ENST00000494057 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
NICN1-206ENST00000494057 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
NICN1-206ENST00000494057 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
NICN1-206ENST00000494057 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
NICN1-206ENST00000494057 JPH4Q96JJ6 628 aa26.86■■□□□ 1.89
NICN1-206ENST00000494057 KIF13AQ9H1H9 1805 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms