RNA–Protein interactions for RNA: ENST00000417902.5

HDAC7-205, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-205ENST00000417902 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
HDAC7-205ENST00000417902 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.76
HDAC7-205ENST00000417902 ABCC9O60706 1549 aa37.79■■■■□ 3.64
HDAC7-205ENST00000417902 DCAF8L2P0C7V8 631 aa36.52■■■■□ 3.44
HDAC7-205ENST00000417902 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
HDAC7-205ENST00000417902 NACADO15069 1562 aa36.31■■■■□ 3.4
HDAC7-205ENST00000417902 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
HDAC7-205ENST00000417902 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
HDAC7-205ENST00000417902 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
HDAC7-205ENST00000417902 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
HDAC7-205ENST00000417902 UNC13AQ9UPW8 1703 aa35.33■■■■□ 3.25
HDAC7-205ENST00000417902 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
HDAC7-205ENST00000417902 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
HDAC7-205ENST00000417902 SHROOM4Q9ULL8 1493 aa34.85■■■■□ 3.17
HDAC7-205ENST00000417902 DNAJC5BQ9UF47 199 aa34.75■■■■□ 3.15
HDAC7-205ENST00000417902 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
HDAC7-205ENST00000417902 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
HDAC7-205ENST00000417902 CECR2Q9BXF3 1484 aa33.96■■■■□ 3.03
HDAC7-205ENST00000417902 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
HDAC7-205ENST00000417902 SMARCA4P51532 1647 aa33.66■■■□□ 2.98
HDAC7-205ENST00000417902 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
HDAC7-205ENST00000417902 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
HDAC7-205ENST00000417902 MROH2BQ7Z745 1585 aa33.5■■■□□ 2.95
HDAC7-205ENST00000417902 SMARCA2P51531 1590 aa33.48■■■□□ 2.95
HDAC7-205ENST00000417902 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
HDAC7-205ENST00000417902 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
HDAC7-205ENST00000417902 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
HDAC7-205ENST00000417902 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
HDAC7-205ENST00000417902 WIZO95785 1651 aa33.09■■■□□ 2.89
HDAC7-205ENST00000417902 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
HDAC7-205ENST00000417902 NESP48681 1621 aa32.69■■■□□ 2.82
HDAC7-205ENST00000417902 CADPSQ9ULU8 1353 aa32.62■■■□□ 2.81
HDAC7-205ENST00000417902 ERCC6Q03468 1493 aa32.59■■■□□ 2.81
HDAC7-205ENST00000417902 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
HDAC7-205ENST00000417902 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
HDAC7-205ENST00000417902 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
HDAC7-205ENST00000417902 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
HDAC7-205ENST00000417902 CFTRP13569 1480 aa32.38■■■□□ 2.77
HDAC7-205ENST00000417902 CUX2O14529 1486 aa32.21■■■□□ 2.75
HDAC7-205ENST00000417902 FANCD2Q9BXW9 1451 aa32.19■■■□□ 2.74
HDAC7-205ENST00000417902 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
HDAC7-205ENST00000417902 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
HDAC7-205ENST00000417902 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
HDAC7-205ENST00000417902 MRC2Q9UBG0 1479 aa32.07■■■□□ 2.72
HDAC7-205ENST00000417902 WDR62O43379 1518 aa31.91■■■□□ 2.7
HDAC7-205ENST00000417902 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
HDAC7-205ENST00000417902 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
HDAC7-205ENST00000417902 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
HDAC7-205ENST00000417902 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
HDAC7-205ENST00000417902 DNMBPQ6XZF7 1577 aa31.59■■■□□ 2.65
HDAC7-205ENST00000417902 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
HDAC7-205ENST00000417902 CUX1P39880 1505 aa31.41■■■□□ 2.62
HDAC7-205ENST00000417902 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
HDAC7-205ENST00000417902 SOGA1O94964 1423 aa31.35■■■□□ 2.61
HDAC7-205ENST00000417902 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
HDAC7-205ENST00000417902 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
HDAC7-205ENST00000417902 DNAJC5Q9H3Z4 198 aa31.31■■■□□ 2.6
HDAC7-205ENST00000417902 RAD54L2Q9Y4B4 1467 aa31.29■■■□□ 2.6
HDAC7-205ENST00000417902 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.65e-6■■■■■ 29.2
HDAC7-205ENST00000417902 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
HDAC7-205ENST00000417902 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.589e-7■■■■□ 23.5
HDAC7-205ENST00000417902 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
HDAC7-205ENST00000417902 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
HDAC7-205ENST00000417902 SYNJ1O43426 1573 aa31.1■■■□□ 2.57
HDAC7-205ENST00000417902 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
HDAC7-205ENST00000417902 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
HDAC7-205ENST00000417902 OSCARQ8IYS5 282 aa31.04■■■□□ 2.56
HDAC7-205ENST00000417902 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
HDAC7-205ENST00000417902 WDR97A6NE52 1622 aa31■■■□□ 2.55
HDAC7-205ENST00000417902 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
HDAC7-205ENST00000417902 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
HDAC7-205ENST00000417902 FBLN2P98095 1184 aa30.9■■■□□ 2.54
HDAC7-205ENST00000417902 SNAPC4Q5SXM2 1469 aa30.84■■■□□ 2.53
HDAC7-205ENST00000417902 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
HDAC7-205ENST00000417902 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
HDAC7-205ENST00000417902 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
HDAC7-205ENST00000417902 SYNJ2O15056 1496 aa30.71■■■□□ 2.51
HDAC7-205ENST00000417902 TRIM41Q8WV44 630 aa30.7■■■□□ 2.51
HDAC7-205ENST00000417902 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
HDAC7-205ENST00000417902 KIF27Q86VH2 1401 aa30.66■■■□□ 2.5
HDAC7-205ENST00000417902 CHD1O14646 1710 aa30.65■■■□□ 2.5
HDAC7-205ENST00000417902 ERICH3Q5RHP9 1530 aa30.64■■■□□ 2.5
HDAC7-205ENST00000417902 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
HDAC7-205ENST00000417902 IGF1RP08069 1367 aa30.57■■■□□ 2.48
HDAC7-205ENST00000417902 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
HDAC7-205ENST00000417902 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
HDAC7-205ENST00000417902 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
HDAC7-205ENST00000417902 CARMIL1Q5VZK9 1371 aa30.39■■■□□ 2.45
HDAC7-205ENST00000417902 NUP160Q12769 1436 aa30.38■■■□□ 2.45
HDAC7-205ENST00000417902 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
HDAC7-205ENST00000417902 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
HDAC7-205ENST00000417902 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
HDAC7-205ENST00000417902 RIMBP3CA6NJZ7 1639 aa30.31■■■□□ 2.44
HDAC7-205ENST00000417902 RIMBP3BA6NNM3 1639 aa30.31■■■□□ 2.44
HDAC7-205ENST00000417902 RIMBP3Q9UFD9 1639 aa30.31■■■□□ 2.44
HDAC7-205ENST00000417902 CUL7Q14999 1698 aa30.3■■■□□ 2.44
HDAC7-205ENST00000417902 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
HDAC7-205ENST00000417902 CYB5RLQ6IPT4 315 aa30.24■■■□□ 2.43
HDAC7-205ENST00000417902 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
HDAC7-205ENST00000417902 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms