RNA–Protein interactions for RNA: ENST00000571372.1

SRRM2-207, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 462 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-207ENST00000571372 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
SRRM2-207ENST00000571372 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
SRRM2-207ENST00000571372 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
SRRM2-207ENST00000571372 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
SRRM2-207ENST00000571372 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
SRRM2-207ENST00000571372 FOXD1Q16676 465 aa21.82■■□□□ 1.08
SRRM2-207ENST00000571372 NISCHQ9Y2I1 1504 aa21.77■■□□□ 1.08
SRRM2-207ENST00000571372 ADRA2BP18089 450 aa20.97■□□□□ 0.95
SRRM2-207ENST00000571372 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
SRRM2-207ENST00000571372 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
SRRM2-207ENST00000571372 MSH5O43196 834 aa20.17■□□□□ 0.82
SRRM2-207ENST00000571372 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
SRRM2-207ENST00000571372 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
SRRM2-207ENST00000571372 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
SRRM2-207ENST00000571372 ABCC9O60706 1549 aa19.1■□□□□ 0.65
SRRM2-207ENST00000571372 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
SRRM2-207ENST00000571372 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
SRRM2-207ENST00000571372 KCNA4P22459 653 aa18.81■□□□□ 0.6
SRRM2-207ENST00000571372 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
SRRM2-207ENST00000571372 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
SRRM2-207ENST00000571372 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
SRRM2-207ENST00000571372 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
SRRM2-207ENST00000571372 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
SRRM2-207ENST00000571372 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
SRRM2-207ENST00000571372 NACADO15069 1562 aa18.35■□□□□ 0.53
SRRM2-207ENST00000571372 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
SRRM2-207ENST00000571372 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
SRRM2-207ENST00000571372 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
SRRM2-207ENST00000571372 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
SRRM2-207ENST00000571372 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
SRRM2-207ENST00000571372 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
SRRM2-207ENST00000571372 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
SRRM2-207ENST00000571372 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
SRRM2-207ENST00000571372 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
SRRM2-207ENST00000571372 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
SRRM2-207ENST00000571372 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
SRRM2-207ENST00000571372 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
SRRM2-207ENST00000571372 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
SRRM2-207ENST00000571372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.42e-15■□□□□ 8.2
SRRM2-207ENST00000571372 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
SRRM2-207ENST00000571372 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
SRRM2-207ENST00000571372 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
SRRM2-207ENST00000571372 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
SRRM2-207ENST00000571372 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
SRRM2-207ENST00000571372 ZBTB22O15209 634 aa17.26■□□□□ 0.35
SRRM2-207ENST00000571372 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
SRRM2-207ENST00000571372 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
SRRM2-207ENST00000571372 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
SRRM2-207ENST00000571372 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
SRRM2-207ENST00000571372 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
SRRM2-207ENST00000571372 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
SRRM2-207ENST00000571372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
SRRM2-207ENST00000571372 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
SRRM2-207ENST00000571372 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
SRRM2-207ENST00000571372 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
SRRM2-207ENST00000571372 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
SRRM2-207ENST00000571372 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
SRRM2-207ENST00000571372 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
SRRM2-207ENST00000571372 APLP2Q06481 763 aa16.88■□□□□ 0.29
SRRM2-207ENST00000571372 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
SRRM2-207ENST00000571372 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
SRRM2-207ENST00000571372 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
SRRM2-207ENST00000571372 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
SRRM2-207ENST00000571372 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
SRRM2-207ENST00000571372 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
SRRM2-207ENST00000571372 CAPN15O75808 1086 aa16.74■□□□□ 0.27
SRRM2-207ENST00000571372 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
SRRM2-207ENST00000571372 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
SRRM2-207ENST00000571372 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
SRRM2-207ENST00000571372 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
SRRM2-207ENST00000571372 WIZO95785 1651 aa16.63■□□□□ 0.25
SRRM2-207ENST00000571372 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
SRRM2-207ENST00000571372 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
SRRM2-207ENST00000571372 NESP48681 1621 aa16.51■□□□□ 0.23
SRRM2-207ENST00000571372 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
SRRM2-207ENST00000571372 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
SRRM2-207ENST00000571372 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
SRRM2-207ENST00000571372 CUX2O14529 1486 aa16.44■□□□□ 0.22
SRRM2-207ENST00000571372 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
SRRM2-207ENST00000571372 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
SRRM2-207ENST00000571372 ABCB7O75027 752 aa16.4■□□□□ 0.22
SRRM2-207ENST00000571372 DSG3P32926 999 aa16.4■□□□□ 0.22
SRRM2-207ENST00000571372 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
SRRM2-207ENST00000571372 POLA2Q14181 598 aa16.36■□□□□ 0.21
SRRM2-207ENST00000571372 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
SRRM2-207ENST00000571372 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
SRRM2-207ENST00000571372 CFTRP13569 1480 aa16.25■□□□□ 0.19
SRRM2-207ENST00000571372 WDR62O43379 1518 aa16.2■□□□□ 0.18
SRRM2-207ENST00000571372 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
SRRM2-207ENST00000571372 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
SRRM2-207ENST00000571372 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
SRRM2-207ENST00000571372 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
SRRM2-207ENST00000571372 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
SRRM2-207ENST00000571372 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
SRRM2-207ENST00000571372 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
SRRM2-207ENST00000571372 FBLN2P98095 1184 aa16.02■□□□□ 0.16
SRRM2-207ENST00000571372 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
SRRM2-207ENST00000571372 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
SRRM2-207ENST00000571372 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
SRRM2-207ENST00000571372 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms